Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02731 and BSU16825
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:02
# Commandline: needle
# -asequence dna-align/BSNT_02731.1.22522.seq
# -bsequence dna-align/BSU16825___ymfD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02731-BSU16825___ymfD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02731-BSU16825___ymfD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02731
# 2: BSU16825___ymfD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1233
# Identity: 1204/1233 (97.6%)
# Similarity: 1204/1233 (97.6%)
# Gaps: 24/1233 ( 1.9%)
# Score: 5989.0
#
#
#=======================================
BSNT_02731 1 ATGTTGAGAGAGAAAAGTGGAATGAAAAATATTATTGCATTGTCTTCCGT 50
||||||||||||||||||||||||||.||
BSU16825___ym 1 ---------------------ATGAAAAATATTATTGCATTGTCTTCTGT 29
BSNT_02731 51 ACCGCTTGTGATGACACTCGGGAACTCCATGCTGATTCCTGTTCTTCCGA 100
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 30 CCCGCTTGTGATGACACTCGGGAACTCCATGCTGATTCCTGTTCTTCCGA 79
BSNT_02731 101 TGATGGAGAAAAAGCTGTCTGTGACTTCATTTCAAGTATCTTTAATCATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 80 TGATGGAGAAAAAGCTGTCTGTGACTTCATTTCAAGTATCTTTAATCATT 129
BSNT_02731 151 ACTGTATATTCAGTAGTAGCAATTATTTGCATTCCGATTGCCGGATATTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 130 ACTGTATATTCAGTAGTAGCAATTATTTGCATTCCGATTGCCGGATATTT 179
BSNT_02731 201 GTCGGATCGTTTCGGGAGAAAAAAAATATTGCTTCCATGCCTCCTCATTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 180 GTCGGATCGTTTCGGGAGAAAAAAAATATTGCTTCCATGCCTCCTCATTG 229
BSNT_02731 251 CAGGATTGGGGGGAGCCGTAGCTGCTTTTGCCTCGACCTATATGAAAAAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 230 CAGGATTGGGGGGAGCCGTAGCTGCTTTTGCCTCGACCTATATGAAAAAT 279
BSNT_02731 301 CCTTATGCTATGATCTTGGCGGGGCGGGTTCTTCAAGGCATTGGTTCTGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 280 CCTTATGCTATGATCTTGGCGGGGCGGGTTCTTCAAGGCATTGGTTCTGC 329
BSNT_02731 351 AGGTGCCGCTCCGATTGTCATGCCGTTTATCGGCGACCTGTTTAAAGGAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 330 AGGTGCCGCTCCGATTGTCATGCCGTTTATCGGCGACCTGTTTAAAGGAG 379
BSNT_02731 401 ACGATGAAAAGGTCAGCGCGGGTCTTGGCGATATTGAAACCGCCAACACG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 380 ACGATGAAAAGGTCAGCGCGGGTCTTGGCGATATTGAAACCGCCAACACG 429
BSNT_02731 451 TCAGGGAAGGTACTGAGTCCCATACTTGGAGCCTTACTGGCTTCTTGGTA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 430 TCAGGGAAGGTACTGAGTCCCATACTTGGAGCCTTACTGGCTTCTTGGTA 479
BSNT_02731 501 TTGGTTTGTACCATTTTGGTTTATTCCGTTTTTCTGTTTGATCAGCTTTT 550
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU16825___ym 480 TTGGTTTGTACCGTTTTGGTTTATTCCGTTTTTCTGTTTGATCAGCTTTT 529
BSNT_02731 551 TGCTCGTATTGTTTTTGGTGGCCAAGCCTGAAGAAGATGAAGATGCGCCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 530 TGCTCGTATTGTTTTTGGTGGCCAAGCCTGAAGAAGATGAAGATGCGCCT 579
BSNT_02731 601 GCTGTTTCTGAGTTTATTAAGAGTGTGAAGAAAATTTTTAAACAGGATGG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 580 GCTGTTTCTGAGTTTATTAAGAGTGTGAAGAAAATTTTTAAACAGGATGG 629
BSNT_02731 651 TCGCTGGCTTTATACGGTCTTCATTATCGGGTGTGTCATTATGTTTTTGT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 630 TCGCTGGCTTTATACGGTCTTCATTATCGGGTGTGTCATTATGTTTTTGT 679
BSNT_02731 701 TATTTGGCGTATTATTTTATTTATCAGATACGCTGGAGAACAAGTATGCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 680 TATTTGGCGTATTATTTTATTTATCAGATACGCTGGAGAACAAGTATGCT 729
BSNT_02731 751 ATTGACGGAGTAGCTAAAGGCGGATTACTGGCAATCCCACTTTTGTTTTT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 730 ATTGACGGAGTAGCTAAAGGCGGATTACTGGCAATCCCACTTTTGTTTTT 779
BSNT_02731 801 GTCAACCAGTTCTTTTATAGCTGGCAAAAAGATCGGTAAAGATAAAGGCC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 780 GTCAACCAGTTCTTTTATAGCTGGCAAAAAGATCGGTAAAGATAAAGGCC 829
BSNT_02731 851 GAATGAAATTTTGCGTTGTTACAGGAATGATTCTGTTAACCCTTTCGTTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 830 GAATGAAATTTTGCGTTGTTACAGGAATGATTCTGTTAACCCTTTCGTTT 879
BSNT_02731 901 ATTGCCTTGTGGTGGAACCACAGTTTTTATTTTTTATTTGTCTTTTTAAG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 880 ATTGCCTTGTGGTGGAACCACAGTTTTTATTTTTTATTTGTCTTTTTAAG 929
BSNT_02731 951 CTTTGGCGGGATTGGGATTGGAATGGCTCTTCCTGCTTTAGATGCACTGA 1000
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU16825___ym 930 CTTTGGCGGGATTGGGATTGGAATGGCTCTTCCTGCTTTAGATGCATTGA 979
BSNT_02731 1001 TAACCGAAGGGATTGAAAGTGAACAATGCGGAACCATTTCCTCCTTCTAC 1050
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU16825___ym 980 TAACCGAAGGGATTGAAAGTGAACAATGCGGAACCATTTCCTCCTTTTAC 1029
BSNT_02731 1051 AATAGCATGCGCTTTATAGGAGTAGCTCTCGGTCCACCTGTTTTTGCTGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 1030 AATAGCATGCGCTTTATAGGAGTAGCTCTCGGTCCACCTGTTTTTGCTGC 1079
BSNT_02731 1101 ATTAATGTCTAATGCAAACTGGATTATTTTCATACTCTCGGCGTTTTGCA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 1080 ATTAATGTCTAATGCAAACTGGATTATTTTCATACTCTCGGCGTTTTGCA 1129
BSNT_02731 1151 GCATCGTTTCTTTATTTTTAGTGCTCTTTACTGTAGATGCTAAAAAAAGT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16825___ym 1130 GCATCGTTTCTTTATTTTTAGTGCTCTTTACTGTAGATGCTAAAAAAAGT 1179
BSNT_02731 1201 GAAGAAGAAGAAAAAAACTTAGGGACGGTCTAG 1233
||||||||||||||||||||||||||||||
BSU16825___ym 1180 ---GAAGAAGAAAAAAACTTAGGGACGGTCTAG 1209
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