Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02722 and BSU16780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:01
# Commandline: needle
# -asequence dna-align/BSNT_02722___ymfA.1.22522.seq
# -bsequence dna-align/BSU16780___rnjB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02722___ymfA-BSU16780___rnjB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02722___ymfA-BSU16780___rnjB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02722___ymfA
# 2: BSU16780___rnjB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1668
# Identity: 1660/1668 (99.5%)
# Similarity: 1660/1668 (99.5%)
# Gaps: 0/1668 ( 0.0%)
# Score: 8268.0
#
#
#=======================================
BSNT_02722___ 1 TTGAAAAAGAAAAATACAGAAAACGTTAGAATTATCGCCCTTGGCGGTGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1 TTGAAAAAGAAAAATACAGAAAACGTTAGAATTATCGCCCTTGGCGGTGT 50
BSNT_02722___ 51 CGGAGAGATTGGGAAGAACCTTTATGTCATTGAAATTGACTCAGACATAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 51 CGGAGAGATTGGGAAGAACCTTTATGTCATTGAAATTGACTCAGACATAT 100
BSNT_02722___ 101 TTGTCGTTGATGCCGGCCTTATGCATCCAGAAAACGAAATGCTCGGTATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 101 TTGTCGTTGATGCCGGCCTTATGCATCCAGAAAACGAAATGCTCGGTATT 150
BSNT_02722___ 151 GATGTAGTGATTCCTGACATATCATATTTGATTGAACGGGCTGACCGCGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 151 GATGTAGTGATTCCTGACATATCATATTTGATTGAACGGGCTGACCGCGT 200
BSNT_02722___ 201 CAAGGCAATCTTTTTAACGCACGGGCACGATGAAAATATCGGCGGCGTTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 201 CAAGGCAATCTTTTTAACGCACGGGCACGATGAAAATATCGGCGGCGTTT 250
BSNT_02722___ 251 TTTACTTATTAAACAAGCTGTCCGTTCCAGTGTACGGAACAAAACTGACG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 251 TTTACTTATTAAACAAGCTGTCCGTTCCAGTGTACGGAACAAAACTGACG 300
BSNT_02722___ 301 CTTGCACTGTTAAGAGAGAAATTAAAACAATACGGACATAACCGAAAAAC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 301 CTTGCACTGTTAAGAGAGAAATTAAAACAATACGGACATAACCGAAAAAC 350
BSNT_02722___ 351 TGATTTAAGAGAAATTCACTCAAAATCTGTCATTACATTTGAATCAACAA 400
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU16780___rn 351 TGATTTAAGAGAAATTCACTCCAAATCTGTCATTACATTTGAATCAACAA 400
BSNT_02722___ 401 AAGTATCGTTCTTTAGAACGATTCACAGCATTCCTGATTCTGTAGGTGTG 450
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 401 AGGTATCGTTCTTTAGAACGATTCACAGCATTCCTGATTCTGTAGGTGTG 450
BSNT_02722___ 451 AGCTTTAAAACATCACTTGGATCTATTGTATGCACGGGAGACTTCAAATT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 451 AGCTTTAAAACATCACTTGGATCTATTGTATGCACGGGAGACTTCAAATT 500
BSNT_02722___ 501 TGACCAAACACCTGCACTTAATCAGACGTGCGACATTGGCGAGATCGCCA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 501 TGACCAAACACCTGCACTTAATCAGACGTGCGACATTGGCGAGATCGCCA 550
BSNT_02722___ 551 AGATCGGCAATAGCGGCGTGCTCGCTCTGCTTTCTGACAGTGCAAATGCG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 551 AGATCGGCAATAGCGGCGTGCTCGCTCTGCTTTCTGACAGTGCAAATGCG 600
BSNT_02722___ 601 GAACGGCCGGGTTACACCCCTTCGGAAGCGGCTGTCAGCGGAGAAATTTC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 601 GAACGGCCGGGTTACACCCCTTCGGAAGCGGCTGTCAGCGGAGAAATTTC 650
BSNT_02722___ 651 GGATGCGCTGTATAATTCACAGAACCGGGTGATTATTGCTGTTTTCGCAT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 651 GGATGCGCTGTATAATTCACAGAACCGGGTGATTATTGCTGTTTTCGCAT 700
BSNT_02722___ 701 CCAATATTAACCGGATTCAGCAAGTCATTCATGCAGCGGCTCAAAATGGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 701 CCAATATTAACCGGATTCAGCAAGTCATTCATGCAGCGGCTCAAAATGGC 750
BSNT_02722___ 751 AGAAAGATTGCCGTAGCCGGAAAAAATCTTCAATCTGTCCTGCAGCTGGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 751 AGAAAGATTGCCGTAGCCGGAAAAAATCTTCAATCTGTCCTGCAGCTGGC 800
BSNT_02722___ 801 GAGAAAGTTAGGATACATTGAAGCAGATGATGAATTGTTTATTTCTGTAC 850
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU16780___rn 801 GAGAAAGTTAGGATATATTGAAGCAGATGATGAATTGTTTATTTCTGTAC 850
BSNT_02722___ 851 AGGATGTCAAAAAATATCCGAAGCGCGAAGTGGCCATTATTACAGCCGGA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 851 AGGATGTCAAAAAATATCCGAAGCGCGAAGTGGCCATTATTACAGCCGGA 900
BSNT_02722___ 901 AGCCAAGGTGAACCATTAGCTGCTTTGACAAGAATGGCAAACAAAGCTCA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 901 AGCCAAGGTGAACCATTAGCTGCTTTGACAAGAATGGCAAACAAAGCTCA 950
BSNT_02722___ 951 CAAACAGCTGAACATTGAAGAAGGGGATACGGTGGTCATTGCGTCAACTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 951 CAAACAGCTGAACATTGAAGAAGGGGATACGGTGGTCATTGCGTCAACTC 1000
BSNT_02722___ 1001 CGATTCCCGGGCAGGAACTCATTTACTCTAAAACAGTAGATCTTCTTGCG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1001 CGATTCCCGGGCAGGAACTCATTTACTCTAAAACAGTAGATCTTCTTGCG 1050
BSNT_02722___ 1051 AGAGCCGGTGCACAAGTCATCTTTGCCCAAAAGCGTGTTCATGTATCAGG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1051 AGAGCCGGTGCACAAGTCATCTTTGCCCAAAAGCGTGTTCATGTATCAGG 1100
BSNT_02722___ 1101 ACACGGCTCACAAGAAGAGTTAAAGCTGATGATCAACCTGCTTAAACCAA 1150
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1101 CCACGGCTCACAAGAAGAGTTAAAGCTGATGATCAACCTGCTTAAACCAA 1150
BSNT_02722___ 1151 AATATTTGATTCCTGTAAACGGCGAATACAGAATGCAAAAAGCTCATTCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1151 AATATTTGATTCCTGTAAACGGCGAATACAGAATGCAAAAAGCTCATTCA 1200
BSNT_02722___ 1201 AAAATCGCTGAAGAAACCGGCATGAAGCGCAGTGACATCTTCTTAATTGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1201 AAAATCGCTGAAGAAACCGGCATGAAGCGCAGTGACATCTTCTTAATTGA 1250
BSNT_02722___ 1251 AAAAGGCGACGTCGTTGAATTCCGCGGCCAAAACGTAAAAATTGGGGATA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1251 AAAAGGCGACGTCGTTGAATTCCGCGGCCAAAACGTAAAAATTGGGGATA 1300
BSNT_02722___ 1301 AAGTTCCTTACGGCAATATTTTAATTGATGGTTTAGGTGTCGGTGATATC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1301 AAGTTCCTTACGGCAATATTTTAATTGATGGTTTAGGTGTCGGTGATATC 1350
BSNT_02722___ 1351 GGCAATATCGTATTGAGAGACCGCCGCTTGCTTTCACAGGACGGAATTTT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1351 GGCAATATCGTATTGAGAGACCGCCGCTTGCTTTCACAGGACGGAATTTT 1400
BSNT_02722___ 1401 AATCGTTGTCATTACACTTGATAAACAAAAGAAACATCTTGTGTCAGGAC 1450
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU16780___rn 1401 AATCGTTGTCATTACACTTGATAAACAAAAGAAACATCTTGTATCAGGAC 1450
BSNT_02722___ 1451 CAGAAATTATCACTCGCGGCTTTGTTTATGTAAGAGAGTCTGAAGGTCTA 1500
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU16780___rn 1451 CAGAAATTATCACTCGCGGCTTTGTTTATGTAAGAGAGTCTGAAGGTCTT 1500
BSNT_02722___ 1501 ATCGTACAGGCTACTGAGCTCGTCCGGTCCATCGTGACAGAAGCGACTGA 1550
||||||||||||||||||||.||.||||||||||||||||||||||||||
BSU16780___rn 1501 ATCGTACAGGCTACTGAGCTTGTACGGTCCATCGTGACAGAAGCGACTGA 1550
BSNT_02722___ 1551 AACATCAAATGTCGAATGGTCAACGCTGAAGCAGGCAATGCGGGATGCTT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1551 AACATCAAATGTCGAATGGTCAACGCTGAAGCAGGCAATGCGGGATGCTT 1600
BSNT_02722___ 1601 TGAACCAATTCCTTTATGAAAAAACGAAACGTAAACCGATGATCATCCCA 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16780___rn 1601 TGAACCAATTCCTTTATGAAAAAACGAAACGTAAACCGATGATCATCCCA 1650
BSNT_02722___ 1651 ATTATTATGGAAGTATAA 1668
||||||||||||||||||
BSU16780___rn 1651 ATTATTATGGAAGTATAA 1668
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