Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02702 and BSU16620

See Amino acid alignment / Visit BSNT_02702 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:58
# Commandline: needle
#    -asequence dna-align/BSNT_02702.1.22522.seq
#    -bsequence dna-align/BSU16620___ylxQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02702-BSU16620___ylxQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02702-BSU16620___ylxQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02702
# 2: BSU16620___ylxQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     231/303 (76.2%)
# Similarity:   231/303 (76.2%)
# Gaps:          72/303 (23.8%)
# Score: 1155.0
# 
#
#=======================================

BSNT_02702         0 --------------------------------------------------      0
                                                                       
BSU16620___yl      1 ATGTCTGGAATGGAATGGTTTCCCTTGCTGGGTCTGGCCAATCGAGCTCG     50

BSNT_02702         1 ----------------------TTGGTAATAAAAGAAATCAGGAATGCGC     28
                                           ||||||||||||||||||||||||||||
BSU16620___yl     51 TAAGGTCGTGTCAGGCGAAGACTTGGTAATAAAAGAAATCAGGAATGCGC    100

BSNT_02702        29 GTGCAAAGCTTGTCCTGCTTACAGAGGATGCATCATCTAACACAGCAAAA     78
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16620___yl    101 GTGCAAAGCTTGTCCTGCTTACAGAGGATGCATCATCTAACACAGCAAAA    150

BSNT_02702        79 AAAGTAACTGACAAGTGCAATTATTATAAAGTCCCTTATAAAAAAGTCGA    128
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16620___yl    151 AAAGTAACTGACAAGTGCAATTATTATAAAGTCCCTTATAAAAAAGTCGA    200

BSNT_02702       129 GAGTCGCGCGGTTCTTGGACGCTCTATCGGTAAAGAAGCCCGTGTCGTTG    178
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16620___yl    201 GAGTCGCGCGGTTCTTGGACGCTCTATCGGTAAAGAAGCCCGTGTCGTTG    250

BSNT_02702       179 TCGCCGTCACTGACCAAGGTTTTGCGAATAAGCTGATCAGCTTGCTCGAT    228
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16620___yl    251 TCGCCGTCACTGACCAAGGTTTTGCGAATAAGCTGATCAGCTTGCTCGAT    300

BSNT_02702       229 TAA    231
                     |||
BSU16620___yl    301 TAA    303


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