Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02694 and BSU16560

See Amino acid alignment / Visit BSNT_02694 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:55
# Commandline: needle
#    -asequence dna-align/BSNT_02694___yluC.1.22522.seq
#    -bsequence dna-align/BSU16560___rseP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02694___yluC-BSU16560___rseP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02694___yluC-BSU16560___rseP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02694___yluC
# 2: BSU16560___rseP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1269
# Identity:    1258/1269 (99.1%)
# Similarity:  1258/1269 (99.1%)
# Gaps:           6/1269 ( 0.5%)
# Score: 6270.0
# 
#
#=======================================

BSNT_02694___      1 ------GTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGT     44
                           ||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs      1 ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGT     50

BSNT_02694___     45 TTTCTTCCATGAACTGGGCCATTTATTGCTAGCCCAAAGAGCGGGAATTC     94
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs     51 TTTCTTCCATGAACTGGGCCATTTATTGCTAGCCCAAAGAGCGGGAATTC    100

BSNT_02694___     95 TCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAA    144
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    101 TCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAA    150

BSNT_02694___    145 AAAAATGAAACAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGT    194
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    151 AAAAATGAAACAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGT    200

BSNT_02694___    195 TCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAACCCGGATACA    244
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    201 TCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAACCCGGATACA    250

BSNT_02694___    245 CGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATC    294
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    251 CGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATC    300

BSNT_02694___    295 AATCAAAAGGAAAAATATCCGGATGCTTTAGTCATTGAAGTGGAAACAGC    344
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    301 AATCAAAAGGAAAAATATCCGGATGCTTTAGTCATTGAAGTGGAAACAGC    350

BSNT_02694___    345 GGATTTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG    394
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    351 GGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG    400

BSNT_02694___    395 ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGAC    444
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    401 ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGAC    450

BSNT_02694___    445 GGAGAAGAAGTGCAGATTGCGCCGTATAATCGCCAATTTGGTTCCAAACC    494
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    451 GGAGAAGAAGTGCAGATTGCGCCGTATAATCGCCAATTTGGTTCCAAACC    500

BSNT_02694___    495 TGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTA    544
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    501 TGTATGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTA    550

BSNT_02694___    545 TTTTAGCTTACGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCG    594
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    551 TTTTAGCTTACGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCG    600

BSNT_02694___    595 TCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGACGGGCAGCTGA    644
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU16560___rs    601 TCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGACGGGCGGCTGA    650

BSNT_02694___    645 AGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAA    694
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    651 AGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAA    700

BSNT_02694___    695 TGAGGTCTTGGACTGACATTGTCTCCGCTGTAAAAGAAAACCCGGAGAAA    744
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    701 TGAGGTCTTGGACTGACATTGTCTCCGCTGTAAAAGAAAACCCGGAGAAA    750

BSNT_02694___    745 GAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT    794
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    751 GAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT    800

BSNT_02694___    795 GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCG    844
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    801 GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCG    850

BSNT_02694___    845 GTTCCTATGCGCCGACTGAAAAAGGCGTACTCTCAGCGGTTGCTTACGGC    894
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    851 GTTCCTATGCGCCGACTGAAAAAGGCGTACTCTCAGCGGTTGCTTACGGC    900

BSNT_02694___    895 GCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAA    944
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    901 GCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAA    950

BSNT_02694___    945 ATTAGTAACAGGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCA    994
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs    951 ATTAGTAACAGGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCA   1000

BSNT_02694___    995 TATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGTGAATTTATTT   1044
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU16560___rs   1001 TATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGTGAACTTATTT   1050

BSNT_02694___   1045 CAGTTTGCGGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCC   1094
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU16560___rs   1051 CAGTTTGCGGCGTTTTTAAGCATTAACCTTGGGATTGTCAACCTGCTTCC   1100

BSNT_02694___   1095 GATTCCGGCACTTGACGGAGGAAGACTGTTGTTTCTATTTATTGAAGCGA   1144
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs   1101 GATTCCGGCACTTGACGGAGGAAGACTGTTGTTTCTATTTATTGAAGCGA   1150

BSNT_02694___   1145 TTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC   1194
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs   1151 TTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC   1200

BSNT_02694___   1195 GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATAT   1244
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs   1201 GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATAT   1250

BSNT_02694___   1245 CCAGCGGCTGTTTTTGTAA   1263
                     |||||||||||||||||||
BSU16560___rs   1251 CCAGCGGCTGTTTTTGTAA   1269


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