Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02694 and BSU16560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:55
# Commandline: needle
# -asequence dna-align/BSNT_02694___yluC.1.22522.seq
# -bsequence dna-align/BSU16560___rseP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02694___yluC-BSU16560___rseP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02694___yluC-BSU16560___rseP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02694___yluC
# 2: BSU16560___rseP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1269
# Identity: 1258/1269 (99.1%)
# Similarity: 1258/1269 (99.1%)
# Gaps: 6/1269 ( 0.5%)
# Score: 6270.0
#
#
#=======================================
BSNT_02694___ 1 ------GTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGT 44
||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 1 ATGTTCGTGAATACAGTTATAGCGTTTATCATTATTTTCGGAACGCTCGT 50
BSNT_02694___ 45 TTTCTTCCATGAACTGGGCCATTTATTGCTAGCCCAAAGAGCGGGAATTC 94
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 51 TTTCTTCCATGAACTGGGCCATTTATTGCTAGCCCAAAGAGCGGGAATTC 100
BSNT_02694___ 95 TCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAA 144
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 101 TCTGCCGTGAATTTGCGATCGGCTTCGGTCCAAAGATTTTTTCTTTCAAA 150
BSNT_02694___ 145 AAAAATGAAACAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGT 194
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 151 AAAAATGAAACAGTTTATACGATCAGGCTGCTTCCGGTCGGCGGATTTGT 200
BSNT_02694___ 195 TCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAACCCGGATACA 244
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 201 TCGTATGGCCGGCGAAGATCCGGAAATGATTGAGGTGAAACCCGGATACA 250
BSNT_02694___ 245 CGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATC 294
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 251 CGGTCGGGCTTCTGTTTAATAAGGAAGATCAAGTTGAGAAAGTCATCATC 300
BSNT_02694___ 295 AATCAAAAGGAAAAATATCCGGATGCTTTAGTCATTGAAGTGGAAACAGC 344
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 301 AATCAAAAGGAAAAATATCCGGATGCTTTAGTCATTGAAGTGGAAACAGC 350
BSNT_02694___ 345 GGATTTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG 394
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 351 GGATCTAGAGCATGACATGAAGATCACCGGTTATGAACAGGGGAAAGAGG 400
BSNT_02694___ 395 ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGAC 444
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 401 ACGAACTTTCCAGCTTTACTGTCAGCGAAACATCCTTTTTTATTGTAGAC 450
BSNT_02694___ 445 GGAGAAGAAGTGCAGATTGCGCCGTATAATCGCCAATTTGGTTCCAAACC 494
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 451 GGAGAAGAAGTGCAGATTGCGCCGTATAATCGCCAATTTGGTTCCAAACC 500
BSNT_02694___ 495 TGTGTGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTA 544
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 501 TGTATGGCAGCGGATTAAAGCAATTGCTGCAGGGCCGATTATGAACTTTA 550
BSNT_02694___ 545 TTTTAGCTTACGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCG 594
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 551 TTTTAGCTTACGTCATTTTAGTGATGCTTGGGCTGATTCAAGGCGTACCG 600
BSNT_02694___ 595 TCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGACGGGCAGCTGA 644
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU16560___rs 601 TCAAATGAACCTATGCTCGGGCAGCTGACAGACAATGGACGGGCGGCTGA 650
BSNT_02694___ 645 AGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAA 694
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 651 AGCAGGGCTAAAAGAAGGGGATTATATCCAAAGCATTAACGGAGAGAAAA 700
BSNT_02694___ 695 TGAGGTCTTGGACTGACATTGTCTCCGCTGTAAAAGAAAACCCGGAGAAA 744
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 701 TGAGGTCTTGGACTGACATTGTCTCCGCTGTAAAAGAAAACCCGGAGAAA 750
BSNT_02694___ 745 GAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT 794
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 751 GAAATGGACGTTGCAGTAAAAAGAGATAACAAAACGCTTCATATTTCGGT 800
BSNT_02694___ 795 GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCG 844
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 801 GACTCCGGAAGCTGTTAAAGATGAGAACAAAAAAACAATCGGACGTTTCG 850
BSNT_02694___ 845 GTTCCTATGCGCCGACTGAAAAAGGCGTACTCTCAGCGGTTGCTTACGGC 894
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 851 GTTCCTATGCGCCGACTGAAAAAGGCGTACTCTCAGCGGTTGCTTACGGC 900
BSNT_02694___ 895 GCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAA 944
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 901 GCGACATCAACAGTTGATGTCACCAAAGCCATTTTAACCAATCTGAGCAA 950
BSNT_02694___ 945 ATTAGTAACAGGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCA 994
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 951 ATTAGTAACAGGCCAATTTAAACTCGATATGCTGTCAGGTCCTGTCGGCA 1000
BSNT_02694___ 995 TATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGTGAATTTATTT 1044
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU16560___rs 1001 TATATGACATGACAGACCAAGTGGCGAAAACAGGGATCGTGAACTTATTT 1050
BSNT_02694___ 1045 CAGTTTGCGGCGTTTTTAAGCATTAATCTTGGGATTGTCAACCTGCTTCC 1094
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU16560___rs 1051 CAGTTTGCGGCGTTTTTAAGCATTAACCTTGGGATTGTCAACCTGCTTCC 1100
BSNT_02694___ 1095 GATTCCGGCACTTGACGGAGGAAGACTGTTGTTTCTATTTATTGAAGCGA 1144
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 1101 GATTCCGGCACTTGACGGAGGAAGACTGTTGTTTCTATTTATTGAAGCGA 1150
BSNT_02694___ 1145 TTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC 1194
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 1151 TTCGGGGCAAACCGATTAACAGGGAAAAAGAAGCATTTGTTGTGTTTATC 1200
BSNT_02694___ 1195 GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATAT 1244
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16560___rs 1201 GGAGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATAT 1250
BSNT_02694___ 1245 CCAGCGGCTGTTTTTGTAA 1263
|||||||||||||||||||
BSU16560___rs 1251 CCAGCGGCTGTTTTTGTAA 1269
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