Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02691 and BSU16540

See Amino acid alignment / Visit BSNT_02691 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:54
# Commandline: needle
#    -asequence dna-align/BSNT_02691___cdsA.1.22522.seq
#    -bsequence dna-align/BSU16540___cdsA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02691___cdsA-BSU16540___cdsA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02691___cdsA-BSU16540___cdsA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02691___cdsA
# 2: BSU16540___cdsA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 810
# Identity:     796/810 (98.3%)
# Similarity:   796/810 (98.3%)
# Gaps:           9/810 ( 1.1%)
# Score: 3960.0
# 
#
#=======================================

BSNT_02691___      1 ---------ATGAAACAAAGAATTTTGACAGGTGTTCTGGCAGCAATTGT     41
                              |||||||||||||||||||||||||||||||||||||||||
BSU16540___cd      1 ATGGTGGACATGAAACAAAGAATTTTGACAGGTGTTCTGGCAGCAATTGT     50

BSNT_02691___     42 ATTTTTATTTTTGGTTATTGTCGGGAAATTGCCGTTCACCATATTAATTT     91
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd     51 ATTTTTATTTTTGGTTATTGTCGGGAAATTGCCGTTCACCATATTAATTT    100

BSNT_02691___     92 ATGCTATGGGCAGTGTGGCGCTTTTTGAACTTTTACGGATGAAAAAGCTG    141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    101 ATGCTATGGGCAGTGTGGCGCTTTTTGAACTTTTACGGATGAAAAAGCTG    150

BSNT_02691___    142 AAGCTGGTTTCACTGCCGGGTTTGATCGGTCTTTTATTATTGTGGATGTT    191
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    151 AAGCTGGTTTCACTGCCGGGTTTGATCGGTCTTTTATTATTGTGGATGTT    200

BSNT_02691___    192 CTTATTGCCAAGCCAGTATTCGTTTTTTGAAGCGGACGGAATTTCCAAAA    241
                     ||||||.||||||||||||||||||||||||||||||||.||||||||||
BSU16540___cd    201 CTTATTACCAAGCCAGTATTCGTTTTTTGAAGCGGACGGGATTTCCAAAA    250

BSNT_02691___    242 TGGAAATCGCTTTATTTGCGGTACTGCTATTGCTGACTTACACAGTGTTG    291
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    251 TGGAAATCGCTTTATTTGCGGTACTGCTATTGCTGACTTACACAGTGTTG    300

BSNT_02691___    292 GTCAAGAACACCTTTACTTTTGATGAAGTCGGGTTTATTACGCTTGCAGC    341
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    301 GTCAAGAACACCTTTACTTTTGATGAAGTCGGGTTTATTACGCTTGCAGC    350

BSNT_02691___    342 AATTTACATCGGAATGTGTTTTCATTATTTTATCGAAATCAGAAATCTTG    391
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    351 AATTTACATCGGAATGTGTTTTCATTATTTTATCGAAATCAGAAATCTTG    400

BSNT_02691___    392 ACCAATACGGATTAACATACATTTTTTATGCGTGTGTTGTCATTTGGTCC    441
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    401 ACCAATACGGATTAACATACATTTTTTATGCGTGTGTTGTCATTTGGTCC    450

BSNT_02691___    442 ACCGATTCCGGTGCCTATTTTGTCGGTAAATCGCTTGGGAAGCGGAAACT    491
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    451 ACCGATTCCGGTGCCTATTTTGTCGGTAAATCGCTTGGGAAGCGGAAACT    500

BSNT_02691___    492 GTGGCCTGAAATCAGTCCGAATAAAACAGTGGAAGGGTTTGCAGGCGGAA    541
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    501 GTGGCCTGAAATCAGTCCGAATAAAACAGTGGAAGGGTTTGCAGGCGGAA    550

BSNT_02691___    542 TTGTCATCGCACTTGTATTGGCGACGATTTTTCAGCTTGTTGCACAACTT    591
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    551 TTGTCATCGCACTTGTATTGGCGACGATTTTTCAGCTTGTTGCACAACTT    600

BSNT_02691___    592 CCGATCCCGTATATCTATCTGCTGTTGATCACGCTGTTTTTGTCTGTTTT    641
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    601 CCGATCCCGTATATCTATCTGCTGTTGATCACGCTGTTTTTGTCTGTTTT    650

BSNT_02691___    642 CGGACAACTTGGAGATTTAGTGGAATCCGCCTTGAAAAGACATTACGATG    691
                     .||||||||.||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    651 TGGACAACTGGGAGATTTAGTGGAATCCGCCTTGAAAAGACATTACGATG    700

BSNT_02691___    692 TAAAGGATTCTGGGAAAATTCTTCCCGGGCATGGCGGTATATTAGACCGT    741
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU16540___cd    701 TAAAGGATTCTGGGAATATTCTTCCCGGGCATGGCGGTATATTAGACCGT    750

BSNT_02691___    742 TTTGACAGTTTCTTGTTTGTCATGCCTTTCTTGTACTTTCTGCTTGCCCT    791
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16540___cd    751 TTTGACAGTTTCTTGTTTGTCATGCCTTTCTTGTACTTTCTGCTTGCCCT    800

BSNT_02691___    792 TTTTTCATAA    801
                     ||||||||||
BSU16540___cd    801 TTTTTCATAA    810


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