Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02690 and BSU16530

See Amino acid alignment / Visit BSNT_02690 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:54
# Commandline: needle
#    -asequence dna-align/BSNT_02690___uppS.1.22522.seq
#    -bsequence dna-align/BSU16530___uppS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02690___uppS-BSU16530___uppS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02690___uppS-BSU16530___uppS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02690___uppS
# 2: BSU16530___uppS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 783
# Identity:     782/783 (99.9%)
# Similarity:   782/783 (99.9%)
# Gaps:           0/783 ( 0.0%)
# Score: 3906.0
# 
#
#=======================================

BSNT_02690___      1 ATGCTCAACATACTCAAAAATTGGAAGAATCAGCAAACTGCGGCTTCCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up      1 ATGCTCAACATACTCAAAAATTGGAAGAATCAGCAAACTGCGGCTTCCAA     50

BSNT_02690___     51 CTTAGAACGTTATACAAAAGAAGACATACTTAAGGGAGAAATTCCCGAAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up     51 CTTAGAACGTTATACAAAAGAAGACATACTTAAGGGAGAAATTCCCGAAC    100

BSNT_02690___    101 ACATCGCCATTATCATGGATGGAAATGGCCGTTGGGCTAAAAAACGCTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    101 ACATCGCCATTATCATGGATGGAAATGGCCGTTGGGCTAAAAAACGCTCT    150

BSNT_02690___    151 CTTCCCAGAATTGCAGGCCACCATGAAGGGATGAAGGTGGTAAAAAGGAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    151 CTTCCCAGAATTGCAGGCCACCATGAAGGGATGAAGGTGGTAAAAAGGAC    200

BSNT_02690___    201 CACGAAGCTCGCAAACGAATTAGGTGTCAAAGTACTGACATTGTATGCAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    201 CACGAAGCTCGCAAACGAATTAGGTGTCAAAGTACTGACATTGTATGCAT    250

BSNT_02690___    251 TTTCAACAGAAAACTGGAAAAGACCGAAAATGGAAGTCGATTTTTTAATG    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU16530___up    251 TTTCAACAGAAAACTGGAAAAGACCGAAAATGGAGGTCGATTTTTTAATG    300

BSNT_02690___    301 AAGCTTCCGGAAGAATTTTTGAATACGTATCTTCCAGAGCTTGTTGAGGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    301 AAGCTTCCGGAAGAATTTTTGAATACGTATCTTCCAGAGCTTGTTGAGGA    350

BSNT_02690___    351 AAATGTACAGGTTCGGATCATTGGGGATGAAACGGCTTTGCCGGCGCACA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    351 AAATGTACAGGTTCGGATCATTGGGGATGAAACGGCTTTGCCGGCGCACA    400

BSNT_02690___    401 CATTACGTGCGATTGAAAAAGCTGTACAGGACACGGCGCAAAACGACGGA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    401 CATTACGTGCGATTGAAAAAGCTGTACAGGACACGGCGCAAAACGACGGA    450

BSNT_02690___    451 ATGATCCTTAATTTTGCTCTTAACTATGGAGGCCGTACTGAAATTGTCAG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    451 ATGATCCTTAATTTTGCTCTTAACTATGGAGGCCGTACTGAAATTGTCAG    500

BSNT_02690___    501 TGCTGCAAAATCACTCGCGGAAAAAGTGAAGGAAGGCTCTTTGAATATTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    501 TGCTGCAAAATCACTCGCGGAAAAAGTGAAGGAAGGCTCTTTGAATATTG    550

BSNT_02690___    551 AAGACATTGATGAATCGCTTTTTTCTACTTATTTGATGACTGAATCTTTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    551 AAGACATTGATGAATCGCTTTTTTCTACTTATTTGATGACTGAATCTTTG    600

BSNT_02690___    601 CAGGATCCTGAACTTTTAATTCGAACGAGCGGCGAGATAAGGCTGAGTAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    601 CAGGATCCTGAACTTTTAATTCGAACGAGCGGCGAGATAAGGCTGAGTAA    650

BSNT_02690___    651 TTTTATGCTATGGCAGGTTGCCTACAGTGAATTTGTCTTTACTGACGTCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    651 TTTTATGCTATGGCAGGTTGCCTACAGTGAATTTGTCTTTACTGACGTCT    700

BSNT_02690___    701 TGTGGCCTGACTTTAAAGAAGATCACTTCTTGCAGGCGTTAGGAGAGTTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16530___up    701 TGTGGCCTGACTTTAAAGAAGATCACTTCTTGCAGGCGTTAGGAGAGTTT    750

BSNT_02690___    751 CAGCAGAGAGGCCGGAGGTTTGGCGGAATTTAG    783
                     |||||||||||||||||||||||||||||||||
BSU16530___up    751 CAGCAGAGAGGCCGGAGGTTTGGCGGAATTTAG    783


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