Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02684 and BSU16480

See Amino acid alignment / Visit BSNT_02684 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:53
# Commandline: needle
#    -asequence dna-align/BSNT_02684___ylxL.1.22522.seq
#    -bsequence dna-align/BSU16480___ylxL.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02684___ylxL-BSU16480___ylxL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02684___ylxL-BSU16480___ylxL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02684___ylxL
# 2: BSU16480___ylxL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity:     503/513 (98.1%)
# Similarity:   503/513 (98.1%)
# Gaps:           9/513 ( 1.8%)
# Score: 2511.0
# 
#
#=======================================

BSNT_02684___      1 GTGAAAAACATGTCAACACTATTATGGCTTTTAAGCTTTACGCTCCACGG     50
                              |||||||||||||||||||||||||||||||.|||||||||
BSU16480___yl      1 ---------ATGTCAACACTATTATGGCTTTTAAGCTTTATGCTCCACGG     41

BSNT_02684___     51 CGTTCTTCTGTACGCTGTCATTATCCTGTATACGAGGCTCGCTGCAGTGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl     42 CGTTCTTCTGTACGCTGTCATTATCCTGTATACGAGGCTCGCTGCAGTGA     91

BSNT_02684___    101 AAGAAACAGAAAAACAGCAAAAACAGATACTTGAAGAGACGGAAAACACC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl     92 AAGAAACAGAAAAACAGCAAAAACAGATACTTGAAGAGACGGAAAACACC    141

BSNT_02684___    151 TTGGCGGCATTTCTGCTTGAATTAAAAGAAGAAAATGAGAAACTGATAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    142 TTGGCGGCATTTCTGCTTGAATTAAAAGAAGAAAATGAGAAACTGATAGA    191

BSNT_02684___    201 AAATAAAGCTTCATCTGCAAGTCAATCAGATGAAGAATCCCAAAAGTCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    192 AAATAAAGCTTCATCTGCAAGTCAATCAGATGAAGAATCCCAAAAGTCAG    241

BSNT_02684___    251 GCCTTCAGACCTCTGAAACATATCAAGAGCGGGATCCAGTCCAAGAGGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    242 GCCTTCAGACCTCTGAAACATATCAAGAGCGGGATCCAGTCCAAGAGGCA    291

BSNT_02684___    301 GAGAATCTTCCTGAACATATTGAAGGTCTGATTACAGAGGTTGACCGTCG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    292 GAGAATCTTCCTGAACATATTGAAGGTCTGATTACAGAGGTTGACCGTCG    341

BSNT_02684___    351 GGAAGAGCTCGTAAACAGTGAGGTCCAATCATTTGAAGACCAGGTCATAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    342 GGAAGAGCTCGTAAACAGTGAGGTCCAATCATTTGAAGACCAGGTCATAG    391

BSNT_02684___    401 AATTATATGAACAGGGATATTCGGCAAGTCAAATTGCCCAGAAAATGAAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    392 AATTATATGAACAGGGATATTCGGCAAGTCAAATTGCCCAGAAAATGAAG    441

BSNT_02684___    451 AGCGGAAAGACAGAAATCGAGCTATTTTTAAAATTTCGCTCCAAAGGTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16480___yl    442 AGCGGAAAGACAGAAATCGAGCTATTTTTAAAATTTCGCTCCAAAGGTGT    491

BSNT_02684___    501 AAAGGATTCTTGA    513
                     |||||||||||||
BSU16480___yl    492 AAAGGATTCTTGA    504


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