Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02683 and BSU16470

See Amino acid alignment / Visit BSNT_02683 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:53
# Commandline: needle
#    -asequence dna-align/BSNT_02683___sigD.1.22522.seq
#    -bsequence dna-align/BSU16470___sigD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02683___sigD-BSU16470___sigD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02683___sigD-BSU16470___sigD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02683___sigD
# 2: BSU16470___sigD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     763/765 (99.7%)
# Similarity:   763/765 (99.7%)
# Gaps:           0/765 ( 0.0%)
# Score: 3807.0
# 
#
#=======================================

BSNT_02683___      1 ATGCAATCCTTGAATTATGAAGATCAGGTGCTTTGGACGCGCTGGAAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si      1 ATGCAATCCTTGAATTATGAAGATCAGGTGCTTTGGACGCGCTGGAAAGA     50

BSNT_02683___     51 GTGGAAAGATCCTAAAGCCGGTGACGACTTAATGCGCCGTTACATGCCGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si     51 GTGGAAAGATCCTAAAGCCGGTGACGACTTAATGCGCCGTTACATGCCGC    100

BSNT_02683___    101 TTGTCACATATCATGTAGGCAGAATTTCTGTCGGGCTGCCGAAATCAGTG    150
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU16470___si    101 TTGTCACATATCATGTAGGCAGAATTTCTGTCGGACTGCCGAAATCAGTG    150

BSNT_02683___    151 CATAAAGACGATCTTATGAGCCTTGGTATGCTTGGTTTATATGATGCCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    151 CATAAAGACGATCTTATGAGCCTTGGTATGCTTGGTTTATATGATGCCCT    200

BSNT_02683___    201 TGAAAAATTTGACCCCAGCCGGGACTTAAAATTTGATACCTACGCCTCGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    201 TGAAAAATTTGACCCCAGCCGGGACTTAAAATTTGATACCTACGCCTCGT    250

BSNT_02683___    251 TTAGAATTCGCGGCGCAATCATAGACGGGCTTCGTAAAGAAGATTGGCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    251 TTAGAATTCGCGGCGCAATCATAGACGGGCTTCGTAAAGAAGATTGGCTG    300

BSNT_02683___    301 CCCAGAACCTCGCGCGAAAAAACAAAAAAGGTTGAAGCAGCAATTGAAAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    301 CCCAGAACCTCGCGCGAAAAAACAAAAAAGGTTGAAGCAGCAATTGAAAA    350

BSNT_02683___    351 GCTTGAACAGCGGTATCTTCGGAATGTATCGCCCGCGGAAATTGCAGAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    351 GCTTGAACAGCGGTATCTTCGGAATGTATCGCCCGCGGAAATTGCAGAGG    400

BSNT_02683___    401 AACTCGGAATGACGGTACAGGATGTCGTGTCAACAATGAATGAAGGTTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    401 AACTCGGAATGACGGTACAGGATGTCGTGTCAACAATGAATGAAGGTTTT    450

BSNT_02683___    451 TTTGCAAATCTGCTGTCAATTGATGAAAAGCTCCATGATCAAGATGATGG    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU16470___si    451 TTTGCAAATCTGCTGTCAATTGATGAAAAGCTCCATGATCAAGATGACGG    500

BSNT_02683___    501 GGAAAACATTCAAGTCATGATCAGAGATGACAAAAATGTTCCGCCTGAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    501 GGAAAACATTCAAGTCATGATCAGAGATGACAAAAATGTTCCGCCTGAAG    550

BSNT_02683___    551 AAAAGATTATGAAGGATGAACTGATTGCACAGCTTGCGGAAAAAATTCAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    551 AAAAGATTATGAAGGATGAACTGATTGCACAGCTTGCGGAAAAAATTCAC    600

BSNT_02683___    601 GAACTCTCTGAAAAAGAACAGCTGGTTGTCAGTTTGTTCTACAAAGAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    601 GAACTCTCTGAAAAAGAACAGCTGGTTGTCAGTTTGTTCTACAAAGAGGA    650

BSNT_02683___    651 GTTGACACTGACAGAAATCGGACAAGTATTAAATCTTTCTACGTCCCGCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    651 GTTGACACTGACAGAAATCGGACAAGTATTAAATCTTTCTACGTCCCGCA    700

BSNT_02683___    701 TATCTCAGATCCATTCAAAGGCATTATTTAAATTAAAGAATCTGCTGGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16470___si    701 TATCTCAGATCCATTCAAAGGCATTATTTAAATTAAAGAATCTGCTGGAA    750

BSNT_02683___    751 AAAGTGATACAATAA    765
                     |||||||||||||||
BSU16470___si    751 AAAGTGATACAATAA    765


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