Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02681 and BSU16450
See
Amino acid alignment /
Visit
BSNT_02681 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:53
# Commandline: needle
# -asequence dna-align/BSNT_02681.1.22522.seq
# -bsequence dna-align/BSU16450___cheC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02681-BSU16450___cheC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02681-BSU16450___cheC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02681
# 2: BSU16450___cheC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity: 298/630 (47.3%)
# Similarity: 298/630 (47.3%)
# Gaps: 330/630 (52.4%)
# Score: 1482.0
#
#
#=======================================
BSNT_02681 0 -------------------------------------------------- 0
BSU16450___ch 1 ATGAGTATTTTTAATGGAATCAAAGAAGAGCAGATGGACATTTTGCGGGA 50
BSNT_02681 0 -------------------------------------------------- 0
BSU16450___ch 51 AGTCGGCAATATAGGCGCCGGCCACTCCGCCTCTGCAATGGCCCAGCTGT 100
BSNT_02681 0 -------------------------------------------------- 0
BSU16450___ch 101 TAAATAGAAAGATAGATATGGAAGTCCCATTTGCAAAGCTGCTGTCTTTT 150
BSNT_02681 0 -------------------------------------------------- 0
BSU16450___ch 151 GATGAGCTTGTTGATTTTTTCGGCGGCGCCGATGTCCCGGTTGCCAGCAT 200
BSNT_02681 0 -------------------------------------------------- 0
BSU16450___ch 201 CTTTTTAAGAATGGAAGGCGATTTAACGGGTTCAATGTTCTTTATAATGC 250
BSNT_02681 0 -------------------------------------------------- 0
BSU16450___ch 251 CTTTTTTTCAGGCGGAGCAGTTTATCAGAGAGCTGATTGGAAACCCCGAT 300
BSNT_02681 1 ------------------------------ATGAGCTCATCCGCTTTGCA 20
||||||||||||||||||||
BSU16450___ch 301 TTTGACATAGAGGACTTAGGTGAAGACCACATGAGCTCATCCGCTTTGCA 350
BSNT_02681 21 TGAACTGGGCAATATTTTAGCGGGGTCATATTTAACAGCTTTGGCGGATT 70
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16450___ch 351 TGAACTGGGCAATATTTTAGCGGGGTCATATTTAACAGCTTTGGCGGATT 400
BSNT_02681 71 TGACGAAACTCCAGCTCTATCCAAGTGTTCCTGAAGTCTCTTTGGACATG 120
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU16450___ch 401 TGACGAAACTCCAGCTCTATCCAAGTGTTCCTGAAGTCTCATTGGACATG 450
BSNT_02681 121 TTCGGAGCAGTGATCAGCGAAGGGCTGATGGAGCTCAGTCAGGTTGGAGA 170
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU16450___ch 451 TTCGGAGCTGTGATCAGCGAAGGGCTGATGGAGCTCAGTCAGGTTGGAGA 500
BSNT_02681 171 ACACGCCATTGTTGTCGACACGTCAATTTTTGACCAAAGCCATCAGCAGG 220
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16450___ch 501 ACACGCCATTGTTGTCGACACGTCAATTTTTGACCAAAGCCATCAGCAGG 550
BSNT_02681 221 AGCTGAAAGCGCATATGTTTATGCTGCCGGACTATGATTCATTTGAAAAG 270
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16450___ch 551 AGCTGAAAGCGCATATGTTTATGCTGCCGGACTATGATTCATTTGAAAAG 600
BSNT_02681 271 CTCTTTGTCGCCTTAGGTGCATCATTATGA 300
||||||||||||||||||||||||||||||
BSU16450___ch 601 CTCTTTGTCGCCTTAGGTGCATCATTATGA 630
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.