Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02681 and BSU16450

See Amino acid alignment / Visit BSNT_02681 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:53
# Commandline: needle
#    -asequence dna-align/BSNT_02681.1.22522.seq
#    -bsequence dna-align/BSU16450___cheC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02681-BSU16450___cheC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02681-BSU16450___cheC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02681
# 2: BSU16450___cheC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 630
# Identity:     298/630 (47.3%)
# Similarity:   298/630 (47.3%)
# Gaps:         330/630 (52.4%)
# Score: 1482.0
# 
#
#=======================================

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BSU16450___ch      1 ATGAGTATTTTTAATGGAATCAAAGAAGAGCAGATGGACATTTTGCGGGA     50

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BSU16450___ch     51 AGTCGGCAATATAGGCGCCGGCCACTCCGCCTCTGCAATGGCCCAGCTGT    100

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BSU16450___ch    101 TAAATAGAAAGATAGATATGGAAGTCCCATTTGCAAAGCTGCTGTCTTTT    150

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BSU16450___ch    151 GATGAGCTTGTTGATTTTTTCGGCGGCGCCGATGTCCCGGTTGCCAGCAT    200

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BSU16450___ch    201 CTTTTTAAGAATGGAAGGCGATTTAACGGGTTCAATGTTCTTTATAATGC    250

BSNT_02681         0 --------------------------------------------------      0
                                                                       
BSU16450___ch    251 CTTTTTTTCAGGCGGAGCAGTTTATCAGAGAGCTGATTGGAAACCCCGAT    300

BSNT_02681         1 ------------------------------ATGAGCTCATCCGCTTTGCA     20
                                                   ||||||||||||||||||||
BSU16450___ch    301 TTTGACATAGAGGACTTAGGTGAAGACCACATGAGCTCATCCGCTTTGCA    350

BSNT_02681        21 TGAACTGGGCAATATTTTAGCGGGGTCATATTTAACAGCTTTGGCGGATT     70
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16450___ch    351 TGAACTGGGCAATATTTTAGCGGGGTCATATTTAACAGCTTTGGCGGATT    400

BSNT_02681        71 TGACGAAACTCCAGCTCTATCCAAGTGTTCCTGAAGTCTCTTTGGACATG    120
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU16450___ch    401 TGACGAAACTCCAGCTCTATCCAAGTGTTCCTGAAGTCTCATTGGACATG    450

BSNT_02681       121 TTCGGAGCAGTGATCAGCGAAGGGCTGATGGAGCTCAGTCAGGTTGGAGA    170
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU16450___ch    451 TTCGGAGCTGTGATCAGCGAAGGGCTGATGGAGCTCAGTCAGGTTGGAGA    500

BSNT_02681       171 ACACGCCATTGTTGTCGACACGTCAATTTTTGACCAAAGCCATCAGCAGG    220
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16450___ch    501 ACACGCCATTGTTGTCGACACGTCAATTTTTGACCAAAGCCATCAGCAGG    550

BSNT_02681       221 AGCTGAAAGCGCATATGTTTATGCTGCCGGACTATGATTCATTTGAAAAG    270
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16450___ch    551 AGCTGAAAGCGCATATGTTTATGCTGCCGGACTATGATTCATTTGAAAAG    600

BSNT_02681       271 CTCTTTGTCGCCTTAGGTGCATCATTATGA    300
                     ||||||||||||||||||||||||||||||
BSU16450___ch    601 CTCTTTGTCGCCTTAGGTGCATCATTATGA    630


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