Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02625 and BSU16060

See Amino acid alignment / Visit BSNT_02625 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:45
# Commandline: needle
#    -asequence dna-align/BSNT_02625___rnhB.1.22522.seq
#    -bsequence dna-align/BSU16060___rnhB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02625___rnhB-BSU16060___rnhB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02625___rnhB-BSU16060___rnhB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02625___rnhB
# 2: BSU16060___rnhB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 768
# Identity:     764/768 (99.5%)
# Similarity:   764/768 (99.5%)
# Gaps:           0/768 ( 0.0%)
# Score: 3804.0
# 
#
#=======================================

BSNT_02625___      1 GTGAATACATTAACCGTAAAGGACATTAAAGACCGTTTGCAGGAAGTGAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn      1 GTGAATACATTAACCGTAAAGGACATTAAAGACCGTTTGCAGGAAGTGAA     50

BSNT_02625___     51 GGATGCACAAGACCCATTTATTGCCCAATGCGAAAACGACCCGAGAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn     51 GGATGCACAAGACCCATTTATTGCCCAATGCGAAAACGACCCGAGAAAAA    100

BSNT_02625___    101 GCGTTCAAACGCTTGTAGAGCAATGGCTTAAAAAGCAAGCGAAAGAAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    101 GCGTTCAAACGCTTGTAGAGCAATGGCTTAAAAAGCAAGCGAAAGAAAAA    150

BSNT_02625___    151 GCGCTGAAAGAACAATGGGTGAATATGACTTCCTATGAAAGGCTGGCAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    151 GCGCTGAAAGAACAATGGGTGAATATGACTTCCTATGAAAGGCTGGCAAG    200

BSNT_02625___    201 AAACAAGGGATTTCGCTTGATTGCAGGTGTTGACGAGGTCGGCCGGGGGC    250
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    201 AAACAAAGGATTTCGCTTGATTGCAGGTGTTGACGAGGTCGGCCGGGGGC    250

BSNT_02625___    251 CATTGGCAGGACCAGTTGTCGCCAGCGCAGTCATCCTTCCAGAGGAATGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    251 CATTGGCAGGACCAGTTGTCGCCAGCGCAGTCATCCTTCCAGAGGAATGT    300

BSNT_02625___    301 GAAATACTTGGGCTGACAGACTCCAAAAAGCTTTCAGAGAAAAAACGCGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    301 GAAATACTTGGGCTGACAGACTCCAAAAAGCTTTCAGAGAAAAAACGCGA    350

BSNT_02625___    351 GGAATATTACGAGCTTATTATGAAGGAAGCACTGGCGGTCGGGATAGGAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    351 GGAATATTACGAGCTTATTATGAAGGAAGCACTGGCGGTCGGGATAGGAA    400

BSNT_02625___    401 TTGTAGAAGCTACTGTGATTGATGAGATCAATATATATGAAGCTTCAAAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    401 TTGTAGAAGCTACTGTGATTGATGAGATCAATATATATGAAGCTTCAAAA    450

BSNT_02625___    451 ATGGCAATGGTGAAAGCGATACAAGATTTGTCGGGTACACCTGATTATTT    500
                     |||||||||||||||||||||||.||||||||||.|||||||||||||||
BSU16060___rn    451 ATGGCAATGGTGAAAGCGATACAGGATTTGTCGGATACACCTGATTATTT    500

BSNT_02625___    501 GCTTGTTGACGCAATGACACTTCCCCTCGACACGGCTCAGGCGTCAATTA    550
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU16060___rn    501 GCTTGTTGACGCAATGACACTTCCGCTCGACACGGCTCAGGCGTCAATTA    550

BSNT_02625___    551 TAAAAGGCGATGCCAAAAGCGTGTCTATTGCGGCAGGTGCGTGTATCGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    551 TAAAAGGCGATGCCAAAAGCGTGTCTATTGCGGCAGGTGCGTGTATCGCA    600

BSNT_02625___    601 AAAGTGACGAGGGACCGAATGATGAGCGCTTATGCCGAAACGTATCCCAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    601 AAAGTGACGAGGGACCGAATGATGAGCGCTTATGCCGAAACGTATCCCAT    650

BSNT_02625___    651 GTACGGCTTTGAAAAAAATAAAGGCTATGGGACAAAAGAACATTTGGAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    651 GTACGGCTTTGAAAAAAATAAAGGCTATGGGACAAAAGAACATTTGGAAG    700

BSNT_02625___    701 CTCTCGCTGCATACGGCCCAACTGAATTGCACCGCAAAACTTTCGCTCCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16060___rn    701 CTCTCGCTGCATACGGCCCAACTGAATTGCACCGCAAAACTTTCGCTCCT    750

BSNT_02625___    751 GTTCAATCTTTCAGATAA    768
                     ||||||||||||||||||
BSU16060___rn    751 GTTCAATCTTTCAGATAA    768


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