Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02618 and BSU16020

See Amino acid alignment / Visit BSNT_02618 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:45
# Commandline: needle
#    -asequence dna-align/BSNT_02618___rimM.1.22522.seq
#    -bsequence dna-align/BSU16020___rimM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02618___rimM-BSU16020___rimM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02618___rimM-BSU16020___rimM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02618___rimM
# 2: BSU16020___rimM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 525
# Identity:     523/525 (99.6%)
# Similarity:   523/525 (99.6%)
# Gaps:           0/525 ( 0.0%)
# Score: 2607.0
# 
#
#=======================================

BSNT_02618___      1 ATGACAAAGCGATGGTTTAACGTAGGCAAAATCGTAAATACCCACGGAAT     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU16020___ri      1 ATGACAAAGCGATGGTTTAATGTAGGCAAAATCGTAAATACCCACGGAAT     50

BSNT_02618___     51 CAAAGGCGAAGTGCGGGTGATTTCAAAAACAGATTTTGCCGAAGAACGAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri     51 CAAAGGCGAAGTGCGGGTGATTTCAAAAACAGATTTTGCCGAAGAACGAT    100

BSNT_02618___    101 ACAAGCCGGGAAACACGCTGTATTTGTTTATGGACGGCCGTAACGAACCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    101 ACAAGCCGGGAAACACGCTGTATTTGTTTATGGACGGCCGTAACGAACCA    150

BSNT_02618___    151 GTGGAGGTAACGGTAAACACACATAGACTGCATAAGCAATTTCATCTCCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    151 GTGGAGGTAACGGTAAACACACATAGACTGCATAAGCAATTTCATCTCCT    200

BSNT_02618___    201 GCAGTTTAAAGAAAGACAAAACCTAAATGAAGTAGAAGAGCTGAAAAACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    201 GCAGTTTAAAGAAAGACAAAACCTAAATGAAGTAGAAGAGCTGAAAAACG    250

BSNT_02618___    251 CAATCATTAAAGTTCCTGAAGAAGAATTAGGAGAGCTGAATGAGGGTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    251 CAATCATTAAAGTTCCTGAAGAAGAATTAGGAGAGCTGAATGAGGGTGAA    300

BSNT_02618___    301 TTTTATTTCCACGAAATTATTGGGTGTGAAGTATTTACTGAAGAAGGCGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    301 TTTTATTTCCACGAAATTATTGGGTGTGAAGTATTTACTGAAGAAGGCGA    350

BSNT_02618___    351 ACTCATCGGAAAGGTCAAAGAAATTTTGACGCCTGGAGCCAATGACGTTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    351 ACTCATCGGAAAGGTCAAAGAAATTTTGACGCCTGGAGCCAATGACGTTT    400

BSNT_02618___    401 GGGTCATCGGACGAAAAGGAAAAAAAGACGCACTCATTCCTTACATTGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    401 GGGTCATCGGACGAAAAGGAAAAAAAGACGCACTCATTCCTTACATTGAA    450

BSNT_02618___    451 TCAGTGGTCAAACATATCGATGTCAGGGAAAAGAAAATTGAGATTGAACT    500
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU16020___ri    451 TCAGTGGTTAAACATATCGATGTCAGGGAAAAGAAAATTGAGATTGAACT    500

BSNT_02618___    501 CATGGAAGGGTTAATAGACGAATGA    525
                     |||||||||||||||||||||||||
BSU16020___ri    501 CATGGAAGGGTTAATAGACGAATGA    525


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