Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02611 and BSU15960

See Amino acid alignment / Visit BSNT_02611 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:44
# Commandline: needle
#    -asequence dna-align/BSNT_02611___ylqB.1.22522.seq
#    -bsequence dna-align/BSU15960___ylqB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02611___ylqB-BSU15960___ylqB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02611___ylqB-BSU15960___ylqB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02611___ylqB
# 2: BSU15960___ylqB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 486
# Identity:     481/486 (99.0%)
# Similarity:   481/486 (99.0%)
# Gaps:           0/486 ( 0.0%)
# Score: 2385.0
# 
#
#=======================================

BSNT_02611___      1 ATGAAAAAAATCGGTTTATTGTTTATGTTATGTCTGGCAGCCCTGTTTAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15960___yl      1 ATGAAAAAAATCGGTTTATTGTTTATGTTATGTCTGGCAGCCCTGTTTAC     50

BSNT_02611___     51 AATAGGTTTTCCGGCACAGCAAGCAGACGCTGCTGAGGCACCTTATAAGG    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU15960___yl     51 AATAGGTTTCCCGGCACAGCAAGCAGACGCTGCTGAGGCACCTTATAAGG    100

BSNT_02611___    101 CTTCGATCACAAATATCAGCACAGATGGAGGGGTTTACGGTAAAATCAAT    150
                     |.||.|||||||||||||||||||||||||||||.|||||||||||||||
BSU15960___yl    101 CCTCAATCACAAATATCAGCACAGATGGAGGGGTATACGGTAAAATCAAT    150

BSNT_02611___    151 TACGGACAAGGTCAATATTGGCGAGTCAAGTACAATATTACAGTAAGCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15960___yl    151 TACGGACAAGGTCAATATTGGCGAGTCAAGTACAATATTACAGTAAGCGG    200

BSNT_02611___    201 CAAATTACTCGACCAAAACGGACAGCCAGTGCCAAACGCGCCCGTAAGAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15960___yl    201 CAAATTACTCGACCAAAACGGACAGCCAGTGCCAAACGCGCCCGTAAGAT    250

BSNT_02611___    251 TTGAAGCGGACACGAAGGTCGGAAACACAACACAAACTGCTTCAGGAACA    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU15960___yl    251 TTGAAGCGGACACGAAGGTCGGAAACACAACACAAACTGCTTCAGGAACG    300

BSNT_02611___    301 ACTGATGCAAACGGAACATTTGAGGTTCCAATGTATTTGGGGCCAGCTGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15960___yl    301 ACTGATGCAAACGGAACATTTGAGGTTCCAATGTATTTGGGGCCAGCTGC    350

BSNT_02611___    351 TGGTTACTATACGTATTACACATCTGTTTCCGTTCATTACTATGACATCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15960___yl    351 TGGTTACTATACGTATTACACATCTGTTTCCGTTCATTACTATGACATCA    400

BSNT_02611___    401 TCCCATTCAGAGTTTTTTCTGGTGAGTCAAGACTGGTATCCACTGATAAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15960___yl    401 TCCCATTCAGAGTTTTTTCTGGTGAGTCAAGACTGGTATCCACTGATAAC    450

BSNT_02611___    451 AGCCTTTATCATTTCGCCTATCAAGTAAGAAGATAA    486
                     ||||||||||||||||||||||||||||||||||||
BSU15960___yl    451 AGCCTTTATCATTTCGCCTATCAAGTAAGAAGATAA    486


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