Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_02604 and BSU15890

See Amino acid alignment / Visit BSNT_02604 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:42
# Commandline: needle
#    -asequence dna-align/BSNT_02604___plsX.1.22522.seq
#    -bsequence dna-align/BSU15890___plsX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02604___plsX-BSU15890___plsX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02604___plsX-BSU15890___plsX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02604___plsX
# 2: BSU15890___plsX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     995/1002 (99.3%)
# Similarity:   995/1002 (99.3%)
# Gaps:           0/1002 ( 0.0%)
# Score: 4947.0
# 
#
#=======================================

BSNT_02604___      1 ATGAGAATAGCTGTAGATGCAATGGGAGGAGACCACGCTCCCAAAGCTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl      1 ATGAGAATAGCTGTAGATGCAATGGGAGGAGACCACGCTCCCAAAGCTGT     50

BSNT_02604___     51 TATTGACGGAGTTATAAAAGGTATAGAGGCATTTGATGATCTCCATATCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl     51 TATTGACGGAGTTATAAAAGGTATAGAGGCATTTGATGATCTCCATATCA    100

BSNT_02604___    101 CACTTGTCGGTGACAAAACAACGATAGAATCACATTTAACAACTACATCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    101 CACTTGTCGGTGACAAAACAACGATAGAATCACATTTAACAACTACATCA    150

BSNT_02604___    151 GATCGCATCACGGTGCTGCACGCAGATGAAGTGATTGAGCCTACGGATGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    151 GATCGCATCACGGTGCTGCACGCAGATGAAGTGATTGAGCCTACGGATGA    200

BSNT_02604___    201 ACCTGTCCGTGCCGTGCGAAGAAAAAAGAACTCATCTATGGTTCTTATGG    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    201 ACCGGTCCGTGCCGTGCGAAGAAAAAAGAACTCATCTATGGTTCTTATGG    250

BSNT_02604___    251 CGCAGGAGGTTGCGGAAAACAGAGCTGACGCCTGCATTTCAGCAGGAAAT    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU15890___pl    251 CGCAGGAGGTTGCGGAAAACAGAGCTGACGCCTGCATTTCAGCGGGAAAT    300

BSNT_02604___    301 ACCGGTGCATTAATGACAGCCGGTCTCTTTATTGTCGGAAGAATTAAAGG    350
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU15890___pl    301 ACCGGTGCATTAATGACAGCCGGTCTCTTTATTGTCGGGAGAATTAAAGG    350

BSNT_02604___    351 AATTGACCGTCCGGCGCTTGCCCCGACACTTCCGACTGTTTCGGGAGACG    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU15890___pl    351 AATTGACCGTCCGGCGCTTGCTCCGACACTTCCGACTGTTTCGGGAGACG    400

BSNT_02604___    401 GATTTCTTCTCCTTGATGTCGGCGCCAATGTCGATGCCAAACCGGAGCAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    401 GATTTCTTCTCCTTGATGTCGGCGCCAATGTCGATGCCAAACCGGAGCAC    450

BSNT_02604___    451 CTCGTTCAATATGCCATCATGGGTTCTGTTTATTCTCAGCAAGTGCGCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    451 CTCGTTCAATATGCCATCATGGGTTCTGTTTATTCTCAGCAAGTGCGCGG    500

BSNT_02604___    501 TGTCACTTCACCGAGAGTCGGACTTTTAAATGTCGGAACAGAAGATAAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    501 TGTCACTTCACCGAGAGTCGGACTTTTAAATGTCGGAACAGAAGATAAAA    550

BSNT_02604___    551 AAGGAAACGAACTGACGAAGCAGACGTTTCAAATTTTAAAAGAAACAGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    551 AAGGAAACGAACTGACGAAGCAGACGTTTCAAATTTTAAAAGAAACAGCA    600

BSNT_02604___    601 AACATCAATTTTATCGGAAACGTGGAAGCGCGAGACCTTTTAGATGATGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    601 AACATCAATTTTATCGGAAACGTGGAAGCGCGAGACCTTTTAGATGATGT    650

BSNT_02604___    651 GGCGGATGTTGTAGTAACAGACGGCTTTACCGGGAATGTTACACTCAAAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    651 GGCGGATGTTGTAGTAACAGACGGCTTTACCGGGAATGTTACACTCAAAA    700

BSNT_02604___    701 CGCTGGAAGGCTCTGCGTTGTCTATTTTTAAAATGATGAGAGACGTAATG    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU15890___pl    701 CGCTGGAAGGCTCTGCGTTGTCAATTTTTAAAATGATGAGAGACGTAATG    750

BSNT_02604___    751 ACGTCTACTTTGACATCCAAGCTTGCAGCAGCTGTGCTGAAGCCAAAATT    800
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU15890___pl    751 ACGTCTACTTTGACATCCAAGCTTGCAGCAGCTGTGCTGAAACCAAAATT    800

BSNT_02604___    801 GAAAGAAATGAAAATGAATATGGAGTATTCGAATTATGGCGGAGCAAGTC    850
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU15890___pl    801 GAAAGAAATGAAAATGAAAATGGAGTATTCGAATTATGGCGGAGCAAGTC    850

BSNT_02604___    851 TTTTTGGCTTAAAAGCGCCTGTGATCAAGGCGCACGGCTCTTCAGATTCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    851 TTTTTGGCTTAAAAGCGCCTGTGATCAAGGCGCACGGCTCTTCAGATTCA    900

BSNT_02604___    901 AATGCTGTATTCCATGCGATTCGGCAAGCAAGAGAGATGGTCAGCCAAAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    901 AATGCTGTATTCCATGCGATTCGGCAAGCAAGAGAGATGGTCAGCCAAAA    950

BSNT_02604___    951 TGTGGCTGCGCTCATTCAGGAAGAAGTGAAAGAAGAAAAAACAGATGAGT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15890___pl    951 TGTGGCTGCGCTCATTCAGGAAGAAGTGAAAGAAGAAAAAACAGATGAGT   1000

BSNT_02604___   1001 AG   1002
                     ||
BSU15890___pl   1001 AG   1002


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02604 and BSU15890

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
