Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02601 and BSU15860

See Amino acid alignment / Visit BSNT_02601 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:41
# Commandline: needle
#    -asequence dna-align/BSNT_02601___sdaAA.1.22522.seq
#    -bsequence dna-align/BSU15860___sdaAA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02601___sdaAA-BSU15860___sdaAA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02601___sdaAA-BSU15860___sdaAA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02601___sdaAA
# 2: BSU15860___sdaAA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 903
# Identity:     897/903 (99.3%)
# Similarity:   897/903 (99.3%)
# Gaps:           0/903 ( 0.0%)
# Score: 4461.0
# 
#
#=======================================

BSNT_02601___      1 ATGTTTCGTAATGTAAAAGAATTAATTGAGATTACTAAAGAAAAACAAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd      1 ATGTTTCGTAATGTAAAAGAATTAATTGAGATTACTAAAGAAAAACAAAT     50

BSNT_02601___     51 ATTGATCTCTGATGTGATGATAGCTCAAGAGATGGAAGTAACAGAAAAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd     51 ATTGATCTCTGATGTGATGATAGCTCAAGAGATGGAAGTAACAGAAAAAA    100

BSNT_02601___    101 CAAAAGAGGACATTTTTCAGCAGATGGATCATAACCTGTCTGTTATGGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    101 CAAAAGAGGACATTTTTCAGCAGATGGATCATAACCTGTCTGTTATGGAA    150

BSNT_02601___    151 GCGGCGGTTCAGAAAGGACTCGAGGGAGTTACGAGCCAAACGGGCTTAAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    151 GCGGCGGTTCAGAAAGGACTCGAGGGAGTTACGAGCCAAACGGGCTTAAC    200

BSNT_02601___    201 AGGCGGAGATGCCGTTAAATTGCAGGCCTATATTCGATCAGGAAAAAGCC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    201 AGGCGGAGATGCCGTTAAATTGCAGGCCTATATTCGATCAGGAAAAAGCC    250

BSNT_02601___    251 TGTCTGGCCCGCTGATTTTAGATGCTGTATCGAAAGCCGTTGCAACAAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    251 TGTCTGGCCCGCTGATTTTAGATGCTGTATCGAAAGCCGTTGCAACAAAT    300

BSNT_02601___    301 GAAGTAAATGCAGCAATGGGAACCATCTGTGCGACACCGACTGCAGGTTC    350
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU15860___sd    301 GAAGTAAATGCAGCCATGGGAACCATCTGTGCGACACCGACTGCAGGTTC    350

BSNT_02601___    351 TGCCGGTGTGGTGCCCGGTACGTTATTTGCTGTAAAAGAAAAGCTGAATC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    351 TGCCGGTGTGGTGCCCGGTACGTTATTTGCTGTAAAAGAAAAGCTGAATC    400

BSNT_02601___    401 CAACAAGAGAACAAATGATCCGCTTTTTGTTTACGGCCGGGGCTTTCGGA    450
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU15860___sd    401 CAACAAGAGAACAAATGATCCGCTTTTTGTTTACAGCCGGGGCTTTCGGA    450

BSNT_02601___    451 TTTGTCGTGGCTAATAACGCAAGCATTTCCGGCGCCGCCGGAGGATGTCA    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU15860___sd    451 TTTGTCGTGGCCAATAACGCAAGCATTTCCGGCGCCGCCGGAGGATGTCA    500

BSNT_02601___    501 GGCAGAGGTTGGATCAGCTTCAGGCATGGCGGCTGCGGCCATTGTTGAAA    550
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU15860___sd    501 GGCAGAGGTTGGATCAGCTTCAGGCATGGCGGCTGCGGCTATTGTTGAAA    550

BSNT_02601___    551 TGGCAGGAGGAACACCCGAACAAAGCGCGGAAGCCATGGCCATTACATTA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    551 TGGCAGGAGGAACACCCGAACAAAGCGCGGAAGCCATGGCCATTACATTA    600

BSNT_02601___    601 AAAAATATGCTAGGCCTCGTGTGCGACCCTGTTGCAGGGCTTGTTGAGGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    601 AAAAATATGCTAGGCCTCGTGTGCGACCCTGTTGCAGGGCTTGTTGAGGT    650

BSNT_02601___    651 GCCTTGCGTGAAACGGAATGCGATGGGCGCGTCAAATGCAATGATTGCCG    700
                     |||||||||||||||||||||||||||||||||||||||.||||||||.|
BSU15860___sd    651 GCCTTGCGTGAAACGGAATGCGATGGGCGCGTCAAATGCGATGATTGCTG    700

BSNT_02601___    701 CTGATATGGCATTGGCGGGCATTACAAGCCGTATTCCATGTGATGAGGTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    701 CTGATATGGCATTGGCGGGCATTACAAGCCGTATTCCATGTGATGAGGTT    750

BSNT_02601___    751 ATCGATGCCATGTATAAAATAGGCCAAACGATGCCAACTGCACTTAGAGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    751 ATCGATGCCATGTATAAAATAGGCCAAACGATGCCAACTGCACTTAGAGA    800

BSNT_02601___    801 AACAGGCCAGGGCGGTTTAGCGGCAACACCGACAGGAAGAGAATTAGAGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    801 AACAGGCCAGGGCGGTTTAGCGGCAACACCGACAGGAAGAGAATTAGAGA    850

BSNT_02601___    851 AAAAAATTTTCGGAGGAGCGCTAGGTTCACGTGAAACAACATCAGCAAAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15860___sd    851 AAAAAATTTTCGGAGGAGCGCTAGGTTCACGTGAAACAACATCAGCAAAC    900

BSNT_02601___    901 TAG    903
                     |||
BSU15860___sd    901 TAG    903


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02601 and BSU15860

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
