Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02572 and BSU15630

See Amino acid alignment / Visit BSNT_02572 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:36
# Commandline: needle
#    -asequence dna-align/BSNT_02572___ylnF.1.22522.seq
#    -bsequence dna-align/BSU15630___sirC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02572___ylnF-BSU15630___sirC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02572___ylnF-BSU15630___sirC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02572___ylnF
# 2: BSU15630___sirC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 489
# Identity:     479/489 (98.0%)
# Similarity:   479/489 (98.0%)
# Gaps:           0/489 ( 0.0%)
# Score: 2355.0
# 
#
#=======================================

BSNT_02572___      1 ATGCTTCCGCTGCACATTAGCCTGGAAAAGAAGAAGGTTGTGATTGCGGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15630___si      1 ATGCTTCCGCTGCACATTAGCCTGGAAAAGAAGAAGGTTGTGATTGCGGG     50

BSNT_02572___     51 GGGCGGCAGCATCGCTCTCAGAAGGCTGAAATCGGTGATTTCTGAGGGAG    100
                     ||||||.||||||||||||||||||||||||.||||||||||||||||||
BSU15630___si     51 GGGCGGAAGCATCGCTCTCAGAAGGCTGAAAACGGTGATTTCTGAGGGAG    100

BSNT_02572___    101 CTGATATAACGCTCGTCAGTCCGGATGTTGAACCGGAAATCAAGCAAATG    150
                     |||||||||||||.||||||||||||||.|||||||||||||||||||||
BSU15630___si    101 CTGATATAACGCTTGTCAGTCCGGATGTGGAACCGGAAATCAAGCAAATG    150

BSNT_02572___    151 GCAGAAGAGCGACGTATCAAATGGGAAAAACGGACAATTGAAAAAGAAGA    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU15630___si    151 GCAGAAGAGCGGCGTATCAAATGGGAAAAACGGACAATTGAAAAAGAAGA    200

BSNT_02572___    201 TTATCTCAATGCTTTCTTCATTATTGCTGCGACGGATAATGCGGCAGTGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15630___si    201 TTATCTCAATGCTTTCTTCATTATTGCTGCGACGGATAATGCGGCAGTGA    250

BSNT_02572___    251 ACAAAGAAATTGCCCAATCCGCTTCGCCTTTTCAGCTTGTCAATTGTGTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15630___si    251 ACAAAGAAATTGCCCAATCCGCTTCGCCTTTTCAGCTTGTCAATTGTGTC    300

BSNT_02572___    301 AGTGACGCTGAGCTTGGCAATGTATATATGCCGAAAATTGTCAAAAGAGG    350
                     ||||||||||||||||||||||||||||||||||||||.||.||||||||
BSU15630___si    301 AGTGACGCTGAGCTTGGCAATGTATATATGCCGAAAATCGTAAAAAGAGG    350

BSNT_02572___    351 GCATGTCACTGTGTCTGTTTCTACAAGCGGAGCCAGTCCAAAGCACACGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15630___si    351 GCATGTCACTGTGTCTGTTTCTACAAGCGGAGCCAGTCCAAAGCACACGA    400

BSNT_02572___    401 AAGAGCTTGCTGAAAACGTGGATAAGCTGATTGACGGCGATTTTATTGCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU15630___si    401 AAGAGCTTGCTGAAAACGTGGATAAGCTGATTGACGGCGATTTTGTTGCT    450

BSNT_02572___    451 GAAGTGAACAGGCTTTATCAGGTGAGAAGGAAGAAATAA    489
                     |||||||||||||||||||||.|||||||.|||||||||
BSU15630___si    451 GAAGTGAACAGGCTTTATCAGATGAGAAGAAAGAAATAA    489


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