Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02550 and BSU15450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:32
# Commandline: needle
# -asequence dna-align/BSNT_02550___lspA.1.22522.seq
# -bsequence dna-align/BSU15450___lspA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02550___lspA-BSU15450___lspA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02550___lspA-BSU15450___lspA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02550___lspA
# 2: BSU15450___lspA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity: 457/465 (98.3%)
# Similarity: 457/465 (98.3%)
# Gaps: 6/465 ( 1.3%)
# Score: 2264.5
#
#
#=======================================
BSNT_02550___ 1 GTGCTGTATTATATGATTGCACTACTTATTATTGCAGCCGATCAATTGAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 1 GTGCTGTATTATATGATTGCACTACTTATTATTGCAGCCGATCAATTGAC 50
BSNT_02550___ 51 AAAATGGCTAGTTGTTAAGAACATGGAACTTGGCCAAAGCATTCCGATCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 51 AAAATGGCTAGTTGTTAAGAACATGGAACTTGGCCAAAGCATTCCGATCA 100
BSNT_02550___ 101 TTGATCAGGTATTCTATATCACCTCCCATCGCAATACGGGTGCTGCATGG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 101 TTGATCAGGTATTCTATATCACCTCCCATCGCAATACGGGTGCTGCATGG 150
BSNT_02550___ 151 GGGATATTAGCGGGTCAAATGTGGTTTTTCTACCTCATAACAACCGCTGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 151 GGGATATTAGCGGGTCAAATGTGGTTTTTCTACCTCATAACAACCGCTGT 200
BSNT_02550___ 201 TATTATTGGTATTGTTTATTACATACAGCGTTATACAAAGGGACAAAGGT 250
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU15450___ls 201 TATTATTGGTATTGTTTATTACATACAGCGTTATACAAAGGGACAAAGGC 250
BSNT_02550___ 251 TTCTTGGCGTTGCCCTCGGACTTATGCTTGGCGGTGCCATCGGCAACTTT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 251 TTCTTGGCGTTGCCCTCGGACTTATGCTTGGCGGTGCCATCGGCAACTTT 300
BSNT_02550___ 301 ATCGATCGGGCTGTCAGACAGGAAGTTGTGGATTTTATCCATGTTATTAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 301 ATCGATCGGGCTGTCAGACAGGAAGTTGTGGATTTTATCCATGTTATTAT 350
BSNT_02550___ 351 TGT------CAATTACCCGATATTTAACATCGCGGACTCTTCATTATGTG 394
||| ||||||||||||||||||||||||||||||||||.||||||
BSU15450___ls 351 TGTCAATTACAATTACCCGATATTTAACATCGCGGACTCTTCACTATGTG 400
BSNT_02550___ 395 TCGGCGTAATGCTTTTATTTATACAAATGCTGTTGGACAGCGGGAAAAAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15450___ls 401 TCGGCGTAATGCTTTTATTTATACAAATGCTGTTGGACAGCGGGAAAAAG 450
BSNT_02550___ 445 AAAAAGGAGCAATAG 459
|||||||||||||||
BSU15450___ls 451 AAAAAGGAGCAATAG 465
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