Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02543 and BSU15400

See Amino acid alignment / Visit BSNT_02543 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:30
# Commandline: needle
#    -asequence dna-align/BSNT_02543___ylmG.1.22522.seq
#    -bsequence dna-align/BSU15400___ylmG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02543___ylmG-BSU15400___ylmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02543___ylmG-BSU15400___ylmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02543___ylmG
# 2: BSU15400___ylmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 273
# Identity:     272/273 (99.6%)
# Similarity:   272/273 (99.6%)
# Gaps:           0/273 ( 0.0%)
# Score: 1356.0
# 
#
#=======================================

BSNT_02543___      1 ATGATCCTTTATCAAGTTTTTTCGGTTTTAAACTTATTAATCACAATATA     50
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU15400___yl      1 ATGATCCTTTATCAAGTTTTTTCGGTTTTAAGCTTATTAATCACAATATA     50

BSNT_02543___     51 CTCATTTGCCCTGATCATATATATTTTTATGTCATGGGTGCCGAGTACGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15400___yl     51 CTCATTTGCCCTGATCATATATATTTTTATGTCATGGGTGCCGAGTACGA    100

BSNT_02543___    101 GGGAAACAGCAGTCGGGCGTTTTTTGGCTTCGATTTGTGAACCATATCTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15400___yl    101 GGGAAACAGCAGTCGGGCGTTTTTTGGCTTCGATTTGTGAACCATATCTC    150

BSNT_02543___    151 GAACCATTCAGAAAAATCATCCCTCCGATTGCAATGCTGGATATTTCACC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15400___yl    151 GAACCATTCAGAAAAATCATCCCTCCGATTGCAATGCTGGATATTTCACC    200

BSNT_02543___    201 AATCGTAGCAATACTTGTGCTTCGGTTTGCGACAACCGGCTTGTGGGGAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15400___yl    201 AATCGTAGCAATACTTGTGCTTCGGTTTGCGACAACCGGCTTGTGGGGAC    250

BSNT_02543___    251 TTTATCGCATGATTGCGTTTTAA    273
                     |||||||||||||||||||||||
BSU15400___yl    251 TTTATCGCATGATTGCGTTTTAA    273


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.