Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02535 and BSU15350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:30
# Commandline: needle
# -asequence dna-align/BSNT_02535___ylmB.1.22522.seq
# -bsequence dna-align/BSU15350___ylmB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02535___ylmB-BSU15350___ylmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02535___ylmB-BSU15350___ylmB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02535___ylmB
# 2: BSU15350___ylmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 1261/1353 (93.2%)
# Similarity: 1261/1353 (93.2%)
# Gaps: 72/1353 ( 5.3%)
# Score: 6225.0
#
#
#=======================================
BSNT_02535___ 1 TTGTTTTTATTAAGCCGTTTCATCACATTTGAAACGGCTTTTTTGATTTT 50
BSU15350___yl 0 -------------------------------------------------- 0
BSNT_02535___ 51 AAAGAATAGGAGCGGATTTACATTGGATCAACAAATAGACTCTTTGCAAA 100
|||||||||||||||.||||||||||||
BSU15350___yl 1 ----------------------TTGGATCAACAAATATACTCTTTGCAAA 28
BSNT_02535___ 101 AAAAAGTGGAAGAACAAAAGGAGGAGCTTATTCAGCTTGCTAAAACACTG 150
||||||||||||||||.|||||||||||||||||||||||.|||||.|||
BSU15350___yl 29 AAAAAGTGGAAGAACATAAGGAGGAGCTTATTCAGCTTGCGAAAACGCTG 78
BSNT_02535___ 151 ATTTCTTATCAAACACCCGCTCCGCCTGCAAGAAATACAGAGGGCATTCA 200
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU15350___yl 79 ATTTCTTATCAAACACCTGCTCCGCCTGCAAGAAATACAGAGGGCATTCA 128
BSNT_02535___ 201 GTCATGGATTGCGGGATTTTTAAATGAATTGGGATTCTCGATCGACAAAT 250
|||.|||||||||||||.||||||||||||||||||||||||||||||||
BSU15350___yl 129 GTCTTGGATTGCGGGATATTTAAATGAATTGGGATTCTCGATCGACAAAT 178
BSNT_02535___ 251 GGGATGTGTACCCTGGAGATCCCAATGTTGTCGGCAAGCTAAAGGGAACA 300
|||||||||||||||||||||||||||||||.||.||||||||.||||||
BSU15350___yl 179 GGGATGTGTACCCTGGAGATCCCAATGTTGTAGGGAAGCTAAAAGGAACA 228
BSNT_02535___ 301 GATTCAGCAGATTATTATAGCCTGATTATCAATGGTCATGTAGATGTGGC 350
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU15350___yl 229 GATTCAGCAGATTATTATAGCCTGATTATCAATGGCCATGTAGATGTGGC 278
BSNT_02535___ 351 AGAGGTAAAAGAGGATGAAGAATGGAAGCACGATCCGTTTCATCCCATTG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 279 AGAGGTAAAAGAGGATGAAGAATGGAAGCACGATCCGTTTCATCCCATTG 328
BSNT_02535___ 401 AAAAAAACGGTCTCTTAATCGGGCGAGGCGCTTCCGATATGAAGGGCGGA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 329 AAAAAAACGGTCTCTTAATCGGGCGAGGCGCTTCCGATATGAAGGGCGGA 378
BSNT_02535___ 451 ATGGCTTGTGTGCTGTTTGCTGTCAAATTAATTCGTGAAGCCGGCATTGA 500
|||||||||||||||||||||||||||||||||||||||||..|||||||
BSU15350___yl 379 ATGGCTTGTGTGCTGTTTGCTGTCAAATTAATTCGTGAAGCAAGCATTGA 428
BSNT_02535___ 501 GCTTCCAGGTGATCTGATTCTGCAATCGGTTATTGGGGAGGAAGTTGGAG 550
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 429 ACTTCCAGGTGATCTGATTCTGCAATCGGTTATTGGGGAGGAAGTTGGAG 478
BSNT_02535___ 551 AGGCCGGCACACTTGAATGCTGCAAGAGGGGCTACCACGCTGATTTTGCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 479 AGGCCGGCACACTTGAATGCTGCAAGAGGGGCTACCACGCTGATTTTGCA 528
BSNT_02535___ 601 ATTGTCGCGGATACGAGCGATATGCATATTCAAGGCCAAGGGGGTGTCAT 650
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU15350___yl 529 ATTGTCGCGGATACGAGCGATATGCATATTCAAGGCCAAGGCGGTGTCAT 578
BSNT_02535___ 651 TACAGGCTGGATCGAAATCAAAAGCAGTCAAACATTTCATGATGGAACGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 579 TACAGGCTGGATCGAAATCAAAAGCAGTCAAACATTTCATGATGGAACGA 628
BSNT_02535___ 701 GACGGAATATGATTCACGCAGGCGGAGGAACATTCGGAGCAAGCGCAATT 750
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU15350___yl 629 GACGGAATATGATTCATGCAGGCGGAGGAACATTCGGAGCAAGCGCAATT 678
BSNT_02535___ 751 GAAAAAATGGCAAAAATCATTGCGGGGCTCGGTGAACTTGAGCGCCACTG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 679 GAAAAAATGGCAAAAATCATTGCGGGGCTCGGTGAACTTGAGCGCCACTG 728
BSNT_02535___ 801 GTCTATTATGAAAAGTTATCCCGGTTTTAAACCAGGCACAAATACGATTA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 729 GTCTATTATGAAAAGTTATCCCGGTTTTAAACCAGGCACAAATACGATTA 778
BSNT_02535___ 851 ACCCGGCAGTTATAGAAGGCGGCAGACATGCGGCTTTTATAGCGGACGAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 779 ACCCGGCAGTTATAGAAGGCGGCAGACATGCGGCTTTTATAGCGGACGAA 828
BSNT_02535___ 901 TGCCGGCTGTGGATCACAGTCCATTTTTATCCGAATGAAACCCATGACCA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 829 TGCCGGCTGTGGATCACAGTCCATTTTTATCCGAATGAAACCCATGACCA 878
BSNT_02535___ 951 AGTGGCAGCGGAAATAGAGGATTACGTCAATCGGCTGAGTGACAGTGATA 1000
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU15350___yl 879 AGTGGCAGCGGAAATAGAAGATTACGTCAATCGGCTGAGTGACAGTGATA 928
BSNT_02535___ 1001 TTTGGCTTAGGGAAAACCGCCCTGTATTCAAGTGGGGAGGCTCATCTATG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 929 TTTGGCTTAGGGAAAACCGCCCTGTATTCAAGTGGGGAGGCTCATCTATG 978
BSNT_02535___ 1051 ATTGAAGACAGAGGAGAAATTTTTCCGGCATTGGAAGTTGACCCTGGCCA 1100
||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU15350___yl 979 ATAGAAGACAGGGGAGAAATTTTTCCGGCATTGGAAGTTGACCCTGGCCA 1028
BSNT_02535___ 1101 CCCAGGCGTCTTAGTGCTAACTGCCTCTCATCAGAAAGTGAAACGGGAGT 1150
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU15350___yl 1029 CCCAGGCGTCTTAGCGCTAACTGCCTCTCATCAGAAAGTGAAACGGGAGT 1078
BSNT_02535___ 1151 GTCCAATTATTGACGTTTCTCAATCAGTTACAGATGGCGGATGGCTGTAT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 1079 GTCCAATTATTGACGTTTCTCAATCAGTTACAGATGGCGGATGGCTGTAT 1128
BSNT_02535___ 1201 GATGCCGGTATTCCATGCGTAATATACGGTCCTGGAGATCTGCACAATGC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 1129 GATGCCGGTATTCCATGCGTAATATACGGTCCTGGAGATCTGCACAATGC 1178
BSNT_02535___ 1251 ACACTCTGTGAACGAGAAGGTATCGATTGAGCAGCTAGTAGAGTATACAA 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 1179 ACACTCTGTGAACGAGAAGGTATCGATTGAGCAGCTAGTAGAGTATACAA 1228
BSNT_02535___ 1301 AAATTATACTCGATTTTATCATCAGCTGGTGCAGCCGGAAAAAAGAACAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU15350___yl 1229 AAATTATACTCGATTTTATCATCAGCTGGTGCAGCCGGAAAAAAGAACAA 1278
BSNT_02535___ 1351 TGA 1353
|||
BSU15350___yl 1279 TGA 1281
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