Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02486 and BSU14980

See Amino acid alignment / Visit BSNT_02486 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:21
# Commandline: needle
#    -asequence dna-align/BSNT_02486___ylbE.1.22522.seq
#    -bsequence dna-align/BSU14980___ylbE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02486___ylbE-BSU14980___ylbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02486___ylbE-BSU14980___ylbE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02486___ylbE
# 2: BSU14980___ylbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity:     238/240 (99.2%)
# Similarity:   238/240 (99.2%)
# Gaps:           0/240 ( 0.0%)
# Score: 1182.0
# 
#
#=======================================

BSNT_02486___      1 ATGCGCAAAGAGGTTCAGGAATATATTTTAGCAAACGAAGAACGGAAACG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14980___yl      1 ATGCGCAAAGAGGTTCAGGAATATATTTTAGCAAACGAAGAACGGAAACG     50

BSNT_02486___     51 ATTCATCAGAGAACAGCCGATATGGTACCGCAGACTTTCAAGAAAACCGG    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU14980___yl     51 ATTCATCAGAGAACAGCCGATATGGTACCGCAGGCTTTCAAGAAAACCGG    100

BSNT_02486___    101 ATGATCTGTCCTCCTTTCAGCTTGAAATGATGAATTTTTATGAAAAAACC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14980___yl    101 ATGATCTGTCCTCCTTTCAGCTTGAAATGATGAATTTTTATGAAAAAACC    150

BSNT_02486___    151 ATTCCGCATCGGGTGAACCAGTTTACGAACGGGATTCAAATGGCGCAAAT    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU14980___yl    151 ATTCCGCATCGGGTGAATCAGTTTACGAACGGGATTCAAATGGCGCAAAT    200

BSNT_02486___    201 GATGATGCAAATGTTTCAAGCGATGCGGACAAAAGATTAA    240
                     ||||||||||||||||||||||||||||||||||||||||
BSU14980___yl    201 GATGATGCAAATGTTTCAAGCGATGCGGACAAAAGATTAA    240


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.