Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02481 and BSU14940

See Amino acid alignment / Visit BSNT_02481 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:20
# Commandline: needle
#    -asequence dna-align/BSNT_02481___ylbA.1.22522.seq
#    -bsequence dna-align/BSU14940___ylbA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02481___ylbA-BSU14940___ylbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02481___ylbA-BSU14940___ylbA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02481___ylbA
# 2: BSU14940___ylbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity:     348/363 (95.9%)
# Similarity:   348/363 (95.9%)
# Gaps:           0/363 ( 0.0%)
# Score: 1680.0
# 
#
#=======================================

BSNT_02481___      1 GTGTTGAAGTTTACTGAAAGCGGACTTGAAGGGGTTAAGGCTGAGCTCAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14940___yl      1 GTGTTGAAGTTTACTGAAAGCGGACTTGAAGGGGTTAAGGCTGAGCTCAG     50

BSNT_02481___     51 CTGGCTAGACGACTTAATGGAAAGCAAAGGTCTCATCAGAGCGGGTCAAT    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU14940___yl     51 CTGGCTAGACGACTTAATGGAAAGCAAAGGTCTTATCAGAGCGGGTCAAT    100

BSNT_02481___    101 GGGATTACGAGAGAGTCACCTATGACAAGAAGTTTTCGACGATTGAGGGC    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU14940___yl    101 GGGATTACGAGAGAGTCACCTATGACAAGAAGTTTTCGACGATTGAGGGT    150

BSNT_02481___    151 ACGTTTTACCTGCGGATACAAGGAATTGCGGCAGAGGGTGATGTCGGAAG    200
                     |||||||||||||||||||||||.|||||||||||.||.|||||||||||
BSU14940___yl    151 ACGTTTTACCTGCGGATACAAGGTATTGCGGCAGAAGGCGATGTCGGAAG    200

BSNT_02481___    201 CGGACGCGCGGTGATTCAATTAATGTCCCCTCTCCTAGGCAAGCATTATT    250
                     |||.|||||.|||||||||||||||||||||||||||||.||||||||.|
BSU14940___yl    201 CGGGCGCGCCGTGATTCAATTAATGTCCCCTCTCCTAGGAAAGCATTACT    250

BSNT_02481___    251 ACCCGCACGGAGTAGAGTATGGAGAAACGGAAGAGTTTCCCGTACAGGTT    300
                     ||||.||.||||||||.|||||||||||||||||||||||||||||||||
BSU14940___yl    251 ACCCTCATGGAGTAGAATATGGAGAAACGGAAGAGTTTCCCGTACAGGTT    300

BSNT_02481___    301 GTGACAAAAAGCAAAGCACTGATTCAGGACATATCCGACATGTTAAAAAC    350
                     ||||||||||||||.||||||||||||||||||.||.|||||||||||||
BSU14940___yl    301 GTGACAAAAAGCAAGGCACTGATTCAGGACATAGCCAACATGTTAAAAAC    350

BSNT_02481___    351 AGTTCAAATGTAA    363
                     |||||||||||||
BSU14940___yl    351 AGTTCAAATGTAA    363


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