Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02481 and BSU14940
See
Amino acid alignment /
Visit
BSNT_02481 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:20
# Commandline: needle
# -asequence dna-align/BSNT_02481___ylbA.1.22522.seq
# -bsequence dna-align/BSU14940___ylbA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02481___ylbA-BSU14940___ylbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02481___ylbA-BSU14940___ylbA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02481___ylbA
# 2: BSU14940___ylbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 348/363 (95.9%)
# Similarity: 348/363 (95.9%)
# Gaps: 0/363 ( 0.0%)
# Score: 1680.0
#
#
#=======================================
BSNT_02481___ 1 GTGTTGAAGTTTACTGAAAGCGGACTTGAAGGGGTTAAGGCTGAGCTCAG 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14940___yl 1 GTGTTGAAGTTTACTGAAAGCGGACTTGAAGGGGTTAAGGCTGAGCTCAG 50
BSNT_02481___ 51 CTGGCTAGACGACTTAATGGAAAGCAAAGGTCTCATCAGAGCGGGTCAAT 100
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU14940___yl 51 CTGGCTAGACGACTTAATGGAAAGCAAAGGTCTTATCAGAGCGGGTCAAT 100
BSNT_02481___ 101 GGGATTACGAGAGAGTCACCTATGACAAGAAGTTTTCGACGATTGAGGGC 150
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU14940___yl 101 GGGATTACGAGAGAGTCACCTATGACAAGAAGTTTTCGACGATTGAGGGT 150
BSNT_02481___ 151 ACGTTTTACCTGCGGATACAAGGAATTGCGGCAGAGGGTGATGTCGGAAG 200
|||||||||||||||||||||||.|||||||||||.||.|||||||||||
BSU14940___yl 151 ACGTTTTACCTGCGGATACAAGGTATTGCGGCAGAAGGCGATGTCGGAAG 200
BSNT_02481___ 201 CGGACGCGCGGTGATTCAATTAATGTCCCCTCTCCTAGGCAAGCATTATT 250
|||.|||||.|||||||||||||||||||||||||||||.||||||||.|
BSU14940___yl 201 CGGGCGCGCCGTGATTCAATTAATGTCCCCTCTCCTAGGAAAGCATTACT 250
BSNT_02481___ 251 ACCCGCACGGAGTAGAGTATGGAGAAACGGAAGAGTTTCCCGTACAGGTT 300
||||.||.||||||||.|||||||||||||||||||||||||||||||||
BSU14940___yl 251 ACCCTCATGGAGTAGAATATGGAGAAACGGAAGAGTTTCCCGTACAGGTT 300
BSNT_02481___ 301 GTGACAAAAAGCAAAGCACTGATTCAGGACATATCCGACATGTTAAAAAC 350
||||||||||||||.||||||||||||||||||.||.|||||||||||||
BSU14940___yl 301 GTGACAAAAAGCAAGGCACTGATTCAGGACATAGCCAACATGTTAAAAAC 350
BSNT_02481___ 351 AGTTCAAATGTAA 363
|||||||||||||
BSU14940___yl 351 AGTTCAAATGTAA 363
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.