Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02433 and BSU14610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:13
# Commandline: needle
# -asequence dna-align/BSNT_02433___pdhD.1.22522.seq
# -bsequence dna-align/BSU14610___pdhD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02433___pdhD-BSU14610___pdhD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02433___pdhD-BSU14610___pdhD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02433___pdhD
# 2: BSU14610___pdhD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1413
# Identity: 1404/1413 (99.4%)
# Similarity: 1404/1413 (99.4%)
# Gaps: 0/1413 ( 0.0%)
# Score: 6984.0
#
#
#=======================================
BSNT_02433___ 1 ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTAATTGGTGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1 ATGGTAGTAGGAGATTTCCCTATTGAAACAGATACTCTTGTAATTGGTGC 50
BSNT_02433___ 51 GGGACCTGGCGGCTATGTAGCTGCCATCCGCGCTGCACAGCTTGGACAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 51 GGGACCTGGCGGCTATGTAGCTGCCATCCGCGCTGCACAGCTTGGACAAA 100
BSNT_02433___ 101 AAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 101 AAGTAACAGTCGTTGAAAAAGCAACTCTTGGAGGCGTTTGTCTGAACGTT 150
BSNT_02433___ 151 GGATGTATCCCTTCAAAAGCGCTGATCAATGCAGGTCACCGTTATGAGAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 151 GGATGTATCCCTTCAAAAGCGCTGATCAATGCAGGTCACCGTTATGAGAA 200
BSNT_02433___ 201 TGCAAAACATTCTGATGACATGGGAATCACTGCTGAGAATGTAACAGTTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 201 TGCAAAACATTCTGATGACATGGGAATCACTGCTGAGAATGTAACAGTTG 250
BSNT_02433___ 251 ATTTCACAAAAGTTCAAGAATGGAAAGCTTCTGTTGTCAACAAGCTTACT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 251 ATTTCACAAAAGTTCAAGAATGGAAAGCTTCTGTTGTCAACAAGCTTACT 300
BSNT_02433___ 301 GGCGGTGTAGCAGGTCTTCTTAAAGGCAACAAAGTAGATGTTGTAAAAGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 301 GGCGGTGTAGCAGGTCTTCTTAAAGGCAACAAAGTAGATGTTGTAAAAGG 350
BSNT_02433___ 351 TGAAGCTTACTTTGTAGACAGCAATTCAGTTCGTGTTATGGATGAGAACT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 351 TGAAGCTTACTTTGTAGACAGCAATTCAGTTCGTGTTATGGATGAGAACT 400
BSNT_02433___ 401 CTGCTCAAACATACACGTTCAAAAATGCAATCATCGCTACTGGATCTCGT 450
|||||||||||||||||||.|||||.||||||||.||||||||.||||||
BSU14610___pd 401 CTGCTCAAACATACACGTTTAAAAACGCAATCATTGCTACTGGTTCTCGT 450
BSNT_02433___ 451 CCTATCGAATTGCCAAACTTCAAATATAGTGAGCGTGTCCTGAATTCAAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 451 CCTATCGAATTGCCAAACTTCAAATATAGTGAGCGTGTCCTGAATTCAAC 500
BSNT_02433___ 501 TGGAGCTTTGGCTCTTAAAGAAATTCCTAAAAAGCTCGTTGTTATCGGCG 550
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 501 TGGCGCTTTGGCTCTTAAAGAAATTCCTAAAAAGCTCGTTGTTATCGGCG 550
BSNT_02433___ 551 GCGGATACATCGGAACTGAACTTGGAACTGCGTATGCTAACTTCGGTACT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 551 GCGGATACATCGGAACTGAACTTGGAACTGCGTATGCTAACTTCGGTACT 600
BSNT_02433___ 601 GAACTTGTTATTCTTGAAGGCGGAGATGAAATTCTTCCTGGCTTCGAAAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 601 GAACTTGTTATTCTTGAAGGCGGAGATGAAATTCTTCCTGGCTTCGAAAA 650
BSNT_02433___ 651 ACAAATGAGTTCTCTCGTTACACGCAGACTGAAGAAAAAAGGCAACGTTG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 651 ACAAATGAGTTCTCTCGTTACACGCAGACTGAAGAAAAAAGGCAACGTTG 700
BSNT_02433___ 701 AAATCCATACAAACGCGATGGCTAAAGGCGTTGAAGAAAGACCAGACGGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 701 AAATCCATACAAACGCGATGGCTAAAGGCGTTGAAGAAAGACCAGACGGC 750
BSNT_02433___ 751 GTAACAGTTACTTTCGAAGTAAAAGGCGAAGAAAAAACGGTTGATGCTGA 800
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU14610___pd 751 GTAACAGTTACTTTCGAAGTAAAAGGCGAAGAAAAAACTGTTGATGCTGA 800
BSNT_02433___ 801 TTACGTATTGATTACAGTAGGACGCCGTCCAAACACTGATGAGCTTGGTC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 801 TTACGTATTGATTACAGTAGGACGCCGTCCAAACACTGATGAGCTTGGTC 850
BSNT_02433___ 851 TTGAGCAAGTCGGTATCGAAATGACGGACCGCGGTATTGTGAAAACTGAC 900
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU14610___pd 851 TTGAGCAAGTCGGTATCGAAATGACGGACCGCGGTATCGTGAAAACTGAC 900
BSNT_02433___ 901 AAACAGTGCCGCACAAACGTACCTAACATTTATGCAATCGGTGATATCAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 901 AAACAGTGCCGCACAAACGTACCTAACATTTATGCAATCGGTGATATCAT 950
BSNT_02433___ 951 CGAAGGACCGCCGCTTGCTCATAAAGCATCTTACGAAGGTAAAATCGCTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 951 CGAAGGACCGCCGCTTGCTCATAAAGCATCTTACGAAGGTAAAATCGCTG 1000
BSNT_02433___ 1001 CAGAAGCTATCGCTGGAGAGCCTGCAGAAATCGATTACCTTGGTATTCCT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1001 CAGAAGCTATCGCTGGAGAGCCTGCAGAAATCGATTACCTTGGTATTCCT 1050
BSNT_02433___ 1051 GCGGTTGTTTTCTCTGAGCCTGAACTTGCATCAGTTGGTTACACTGAAGC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1051 GCGGTTGTTTTCTCTGAGCCTGAACTTGCATCAGTTGGTTACACTGAAGC 1100
BSNT_02433___ 1101 ACAGGCGAAAGAAGAAGGTCTTGACATTGTTGCTGCTAAATTCCCATTTG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1101 ACAGGCGAAAGAAGAAGGTCTTGACATTGTTGCTGCTAAATTCCCATTTG 1150
BSNT_02433___ 1151 CAGCAAACGGCCGCGCGCTTTCTCTTAACGAAACAGACGGCTTCATGAAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1151 CAGCAAACGGCCGCGCGCTTTCTCTTAACGAAACAGACGGCTTCATGAAG 1200
BSNT_02433___ 1201 CTGATCACTCGTAAAGAGGACGGTCTTGTGATCGGTGCGCAAATCGCCGG 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1201 CTGATCACTCGTAAAGAGGACGGTCTTGTGATCGGTGCGCAAATCGCCGG 1250
BSNT_02433___ 1251 AGCAAGTGCTTCTGATATGATTTCTGAATTAAGCCTAGCGATTGAAGGCG 1300
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU14610___pd 1251 AGCAAGTGCTTCTGATATGATTTCTGAATTAAGCTTAGCGATTGAAGGCG 1300
BSNT_02433___ 1301 GCATGACTGCTGAAGATATCGCGATGACAATTCACGCTCACCCAACATTG 1350
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU14610___pd 1301 GCATGACTGCTGAAGATATCGCAATGACAATTCACGCTCACCCAACATTG 1350
BSNT_02433___ 1351 GGCGAAATCACAATGGAAGCTGCTGAAGTGGCAATCGGAAGTCCGATTCA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14610___pd 1351 GGCGAAATCACAATGGAAGCTGCTGAAGTGGCAATCGGAAGTCCGATTCA 1400
BSNT_02433___ 1401 CATCGTAAAATAA 1413
|||||||||||||
BSU14610___pd 1401 CATCGTAAAATAA 1413
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