Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02397 and BSU14350
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:08
# Commandline: needle
# -asequence dna-align/BSNT_02397___yknX.1.22522.seq
# -bsequence dna-align/BSU14350___yknX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02397___yknX-BSU14350___yknX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02397___yknX-BSU14350___yknX.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02397___yknX
# 2: BSU14350___yknX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1134
# Identity: 1127/1134 (99.4%)
# Similarity: 1127/1134 (99.4%)
# Gaps: 0/1134 ( 0.0%)
# Score: 5607.0
#
#
#=======================================
BSNT_02397___ 1 ATGAAAAAAGTCTGGATCGGAATTGGAATCGCAGTTATAGTCGCTCTTTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 1 ATGAAAAAAGTCTGGATCGGAATTGGAATCGCAGTTATAGTCGCTCTTTT 50
BSNT_02397___ 51 TGTTGGAATCAATATATACCGGTCTGCCGCTCCAACAAGCGGCAGCGCCG 100
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU14350___yk 51 TGTTGGAATCAATATATACCGGTCTGCCGCTCCGACAAGCGGCAGCGCCG 100
BSNT_02397___ 101 GCAAGGAGATACAGACGGGGAGCGTTGAAGAAAATGAAATCTCATCAACG 150
||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 101 GCAAGGAGGTACAGACGGGGAGCGTTGAAGAAAATGAAATCTCATCAACG 150
BSNT_02397___ 151 GTTATGGTTCCTGGCACGCTAAAATTTTCAAATGAACAGTATGTCTTTTA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 151 GTTATGGTTCCTGGCACGCTAAAATTTTCAAATGAACAGTATGTCTTTTA 200
BSNT_02397___ 201 TGAAGCGGATAAAGGGACATTAGAAGACATTAAAGTTAAGGAAGGCGATA 250
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU14350___yk 201 TGAAGCGGATAAAGGGACATTAGAAGACATTAAAGTAAAGGAAGGCGATA 250
BSNT_02397___ 251 AAGTTAAAAAGGGCACGCCTTTAGTCACCTATACAAATGAGCAGCTGAGC 300
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU14350___yk 251 AAGTTAAAAAGGGCACGGCTTTAGTCACCTATACAAATGAGCAGCTGAGC 300
BSNT_02397___ 301 CTGGAAAAAGAACAGAACCAGTTAACGTCTGAATCCAACCGGCTTCAAAT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 301 CTGGAAAAAGAACAGAACCAGTTAACGTCTGAATCCAACCGGCTTCAAAT 350
BSNT_02397___ 351 TGACCAAATTCAAGAAAAGTTAAAAGCCTTAGACAGCAAAGAAAGAGAAC 400
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU14350___yk 351 TGACCAAATTCAAGAAAAGTTAAAAGCCTTGGACAGCAAAGAAAGAGAAC 400
BSNT_02397___ 401 TGGAAAAACAGGTAGGAAAGAAAGAAGCAGAAAAACAAATCGAATCTGAA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 401 TGGAAAAACAGGTAGGAAAGAAAGAAGCAGAAAAACAAATCGAATCTGAA 450
BSNT_02397___ 451 CGGACAGAGCTTCAAATGCAGAAAAAAACAGCGGAGATCGAATTAAAACA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 451 CGGACAGAGCTTCAAATGCAGAAAAAAACAGCGGAGATCGAATTAAAACA 500
BSNT_02397___ 501 AACCGAGCTTCAGCGGCAGTCACTTGCCAACCGGGTGTCAGATTTAGAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 501 AACCGAGCTTCAGCGGCAGTCACTTGCCAACCGGGTGTCAGATTTAGAAG 550
BSNT_02397___ 551 TGAAAAGCGAAATTGAAGGCACCGTTATTTCTGTCAACCAAGAAGCGGCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 551 TGAAAAGCGAAATTGAAGGCACCGTTATTTCTGTCAACCAAGAAGCGGCA 600
BSNT_02397___ 601 TCCAAAAAGTCAGATATTCAAGAGCCTGTCATACATATCGGCAACCCAAA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 601 TCCAAAAAGTCAGATATTCAAGAGCCTGTCATACATATCGGCAACCCAAA 650
BSNT_02397___ 651 AGACCTTGTCGTCTCAGGGAAATTGTCTGAATACGATACATTGAAAGTCA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 651 AGACCTTGTCGTCTCAGGGAAATTGTCTGAATACGATACATTGAAAGTCA 700
BSNT_02397___ 701 AAAAAGGCCAGAAGGTCACACTCACTTCAGATGTAATACAGGGTAAAACA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 701 AAAAAGGCCAGAAGGTCACACTCACTTCAGATGTAATACAGGGTAAAACA 750
BSNT_02397___ 751 TGGAAAGGCACGGTTTCCGCAGTCGGGCTTGTTCCGGATCAGCAGGAGAG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 751 TGGAAAGGCACGGTTTCCGCAGTCGGGCTTGTTCCGGATCAGCAGGAGAG 800
BSNT_02397___ 801 CGCTGCGGCACAAGGAACAGAACAGGCGGTCCAATACCCGCTTCAAGTGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 801 CGCTGCGGCACAAGGAACAGAACAGGCGGTCCAATACCCGCTTCAAGTGA 850
BSNT_02397___ 851 AAATAAAAGGAAATCTTCCAGAAGGAAAGCCAGGCTTTAAATTTATCATG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 851 AAATAAAAGGAAATCTTCCAGAAGGAAAGCCAGGCTTTAAATTTATCATG 900
BSNT_02397___ 901 AATATTGAAACAGATAAACGGAAAGCAAATACGCTTCCTTCAAAGGCAGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 901 AATATTGAAACAGATAAACGGAAAGCAAATACGCTTCCTTCAAAGGCAGT 950
BSNT_02397___ 951 CAAAAAAGAAGATGACCAATATTATGTGTATACAGTAAAAGACGGAAAAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 951 CAAAAAAGAAGATGACCAATATTATGTGTATACAGTAAAAGACGGAAAAG 1000
BSNT_02397___ 1001 CAAAGCGAGTTAATGTCAAAATCGGCGAAGTGACAGATGACCTGACAGAA 1050
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU14350___yk 1001 CAAAGCGAGTTGATGTCAAAATCGGCGAAGTGACAGATGACCTGACAGAA 1050
BSNT_02397___ 1051 ATTAAAGAGGGGCTTACCCAAGATGATCAAGTCATTTTGAATCCATCTGA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14350___yk 1051 ATTAAAGAGGGGCTTACCCAAGATGATCAAGTCATTTTGAATCCATCTGA 1100
BSNT_02397___ 1101 TCAGGTGACTGACGGAATGGAAGTGAAATCTTAA 1134
||||||||||||||||||||||||||||||.|||
BSU14350___yk 1101 TCAGGTGACTGACGGAATGGAAGTGAAATCCTAA 1134
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