Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02373 and BSU14220

See Amino acid alignment / Visit BSNT_02373 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:06
# Commandline: needle
#    -asequence dna-align/BSNT_02373___ykuU.1.22522.seq
#    -bsequence dna-align/BSU14220___ykuU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02373___ykuU-BSU14220___ykuU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02373___ykuU-BSU14220___ykuU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02373___ykuU
# 2: BSU14220___ykuU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 543
# Identity:     539/543 (99.3%)
# Similarity:   539/543 (99.3%)
# Gaps:           0/543 ( 0.0%)
# Score: 2679.0
# 
#
#=======================================

BSNT_02373___      1 ATGGCAGAACGTATGGTAGGTAAACAAGCTCCTCGTTTTGAAATGGAAGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk      1 ATGGCAGAACGTATGGTAGGTAAACAAGCTCCTCGTTTTGAAATGGAAGC     50

BSNT_02373___     51 AGTCCTTGCAAGCAAAGAATTCGGCAAAGTAAGTCTTGAGGAAAACATGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk     51 AGTCCTTGCAAGCAAAGAATTCGGCAAAGTAAGTCTTGAGGAAAACATGA    100

BSNT_02373___    101 AAAACGACAAATGGACAGTGCTATTCTTCTATCCAATGGATTTCACTTTT    150
                     ||||||||||||||||||||||.|||||||||||||||||.|||||||||
BSU14220___yk    101 AAAACGACAAATGGACAGTGCTGTTCTTCTATCCAATGGACTTCACTTTT    150

BSNT_02373___    151 GTTTGTCCCACAGAAATTACAGCAATGTCTGACCGCTATGACGAGTTCGA    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    151 GTTTGTCCGACAGAAATTACAGCAATGTCTGACCGCTATGACGAGTTCGA    200

BSNT_02373___    201 AGATCTTGATGCAGAAGTCATCGGGGTTTCAACTGATACCATCCATACTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    201 AGATCTTGATGCAGAAGTCATCGGGGTTTCAACTGATACCATCCATACTC    250

BSNT_02373___    251 ATTTAGCTTGGATCAATACAGACCGCAAAGAAAACGGTCTTGGCCAGCTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    251 ATTTAGCTTGGATCAATACAGACCGCAAAGAAAACGGTCTTGGCCAGCTG    300

BSNT_02373___    301 AAATACCCGCTTGCTGCTGATACAAACCATGAGGTATCCCGGGAATATGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    301 AAATACCCGCTTGCTGCTGATACAAACCATGAGGTATCCCGGGAATATGG    350

BSNT_02373___    351 CGTTTTAATCGAAGAAGAAGGTGTGGCTTTGCGCGGATTGTTTATTATTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    351 CGTTTTAATCGAAGAAGAAGGTGTGGCTTTGCGCGGATTGTTTATTATTA    400

BSNT_02373___    401 ATCCTGAAGGGGAGCTTCAATATCAAACTGTTTTCCATAACAATATTGGG    450
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU14220___yk    401 ATCCTGAAGGGGAGCTTCAATATCAAACTGTTTTCCATAACAACATTGGG    450

BSNT_02373___    451 CGTGATGTTGATGAAACGCTTCGTGTTCTCCAGGCGCTGCAAACTGGCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    451 CGTGATGTTGATGAAACGCTTCGTGTTCTCCAGGCGCTGCAAACTGGCGG    500

BSNT_02373___    501 ACTCTGTCCGGCTAACTGGAAACCAGGCCAAAAAACACTTTAA    543
                     |||||||||||||||||||||||||||||||||||||||||||
BSU14220___yk    501 ACTCTGTCCGGCTAACTGGAAACCAGGCCAAAAAACACTTTAA    543


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