Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02368 and BSU14200

See Amino acid alignment / Visit BSNT_02368 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:05
# Commandline: needle
#    -asequence dna-align/BSNT_02368___ykuS.1.22522.seq
#    -bsequence dna-align/BSU14200___ykuS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02368___ykuS-BSU14200___ykuS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02368___ykuS-BSU14200___ykuS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02368___ykuS
# 2: BSU14200___ykuS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 246
# Identity:     242/246 (98.4%)
# Similarity:   242/246 (98.4%)
# Gaps:           0/246 ( 0.0%)
# Score: 1194.0
# 
#
#=======================================

BSNT_02368___      1 ATGGCTAAAAAAATAGGAATTGAACAATCATTATCAGATGTAGAAGCTGC     50
                     ||||||||||||||.||||||||||||||.||||||||||||||||||||
BSU14200___yk      1 ATGGCTAAAAAAATTGGAATTGAACAATCGTTATCAGATGTAGAAGCTGC     50

BSNT_02368___     51 TTTAAAAGAAAAAGGATATGACGTTGTAATGATGAAAAGCCCTGCTGATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14200___yk     51 TTTAAAAGAAAAAGGATATGACGTTGTAATGATGAAAAGCCCTGCTGATG    100

BSNT_02368___    101 CTCAAGGCTGTGACTGCTGTGTCGTAACAGGTCTTGATAATAATGTGCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14200___yk    101 CTCAAGGCTGTGACTGCTGTGTCGTAACAGGTCTTGATAATAATGTGCAA    150

BSNT_02368___    151 GGGATAGCCGATACGGTAACACAAGCACCTGTCATTACAGCTTCCGGGAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14200___yk    151 GGGATAGCCGATACGGTAACACAAGCACCTGTCATTACAGCTTCCGGGAT    200

BSNT_02368___    201 GACGGCTGAAGAAATTTGCAGCGAAGTTGAAAGCAGAATTCAGTAA    246
                     ||||||||||||||||||.|||||||||||.|||||||||||||||
BSU14200___yk    201 GACGGCTGAAGAAATTTGTAGCGAAGTTGAGAGCAGAATTCAGTAA    246


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