Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02361 and BSU14140

See Amino acid alignment / Visit BSNT_02361 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:04
# Commandline: needle
#    -asequence dna-align/BSNT_02361___ccpC.1.22522.seq
#    -bsequence dna-align/BSU14140___ccpC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02361___ccpC-BSU14140___ccpC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02361___ccpC-BSU14140___ccpC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02361___ccpC
# 2: BSU14140___ccpC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity:     877/882 (99.4%)
# Similarity:   877/882 (99.4%)
# Gaps:           0/882 ( 0.0%)
# Score: 4365.0
# 
#
#=======================================

BSNT_02361___      1 ATGCAGCTTCAAGAGCTTCATATGCTCGTAGTTTTAGCTGAGGAATTAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc      1 ATGCAGCTTCAAGAGCTTCATATGCTCGTAGTTTTAGCTGAGGAATTAAA     50

BSNT_02361___     51 TATGAGAAAGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc     51 TATGAGAAAGGCGGCAGAACGGCTTTTTGTATCTCAGCCGGCTTTATCTC    100

BSNT_02361___    101 AGCGCTTACAAACCATTGAAAAGGCGTGGGGAAAAAAAATCTTTTTAAGA    150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU14140___cc    101 AGCGCTTACAAACCATTGAAAAGGCGTGGGGAACAAAAATCTTTTTAAGA    150

BSNT_02361___    151 TCTCAAAAAGGATTAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    151 TCTCAAAAAGGATTAACGGTAACGCCCGCCGGTGAGAAAATCATTCAGTT    200

BSNT_02361___    201 TGCGAATGATGTGACATTAGAGCAGGAAAGAATAAGAGAAAATATTGACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    201 TGCGAATGATGTGACATTAGAGCAGGAAAGAATAAGAGAAAATATTGACG    250

BSNT_02361___    251 AGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCCATA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    251 AGCTTGAAGGTGAAATTCACGGCACATTGAAGCTTGCCGTCGCCTCCATA    300

BSNT_02361___    301 ATCGGTCAGCATTGGCTCCCTAAAGTCCTGAAGACGTATGTTGAAAAGTA    350
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU14140___cc    301 ATCGGTCAGCATTGGCTCCCTAAAGTCCTGAAGACGTATGTGGAAAAGTA    350

BSNT_02361___    351 TCCGAATGCAAAGATCTCGCTCATAACCGGGTGGAGCAGCGAAATGCTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    351 TCCGAATGCAAAGATCTCGCTCATAACCGGGTGGAGCAGCGAAATGCTGA    400

BSNT_02361___    401 AAAGCTTGTATGAGGATCAGGTTCATATCGGCATTATAAGAGGCAACCCT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    401 AAAGCTTGTATGAGGATCAGGTTCATATCGGCATTATAAGAGGCAACCCT    450

BSNT_02361___    451 GAGTGGAAGGGGCGCAAAGATTACTTAATGACAGATCATCTGTATTTAGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    451 GAGTGGAAGGGGCGCAAAGATTACTTAATGACAGATCATCTGTATTTAGT    500

BSNT_02361___    501 GGATACTGAAATTTCCTGCATCGAAGATATTGCCCATACAGAACGGCCGT    550
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU14140___cc    501 GGATACTGAAATTTCCTGCATCGAAGATATTGCCCATACAGAACGTCCGT    550

BSNT_02361___    551 TTATCCAGTTTAAAAGTGATAGCACTTATTTTCAGGAAATTCAGCACTGG    600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU14140___cc    551 TTATCCAGTTTAAAAGTGACAGCACTTATTTTCAGGAAATTCAGCACTGG    600

BSNT_02361___    601 TGGCATCAAAAATTTAAAACGTCGCCGAAACAGACGATATTGGTTGATCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    601 TGGCATCAAAAATTTAAAACGTCGCCGAAACAGACGATATTGGTTGATCA    650

BSNT_02361___    651 GATTGAAACGTGCAAACAGATGGCGCTGCACGGAATCGGTTATGCCATTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    651 GATTGAAACGTGCAAACAGATGGCGCTGCACGGAATCGGTTATGCCATTT    700

BSNT_02361___    701 TGCCGTCTGTTACCCTTCAAAATGAAGATAAAGTGAATAAAATGCCTCTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    701 TGCCGTCTGTTACCCTTCAAAATGAAGATAAAGTGAATAAAATGCCTCTT    750

BSNT_02361___    751 TTAGACATGAAAGGGCATCCGATCGGTCGGGATACATGGTTATTAGGCTA    800
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU14140___cc    751 TTAGACATGAAAGGGCATCCGATCGGTCGGGATACATGGTTATTAGGTTA    800

BSNT_02361___    801 TGAGCCTGCCTTTGAACTGAAACAAGTTCAAGCTTTTGTACAAGTGATAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14140___cc    801 TGAGCCTGCCTTTGAACTGAAACAAGTTCAAGCTTTTGTACAAGTGATAA    850

BSNT_02361___    851 AGGATATGCTGGATCAGGAAAATCCATTTTAA    882
                     ||||||||||||||||||||||||||||||||
BSU14140___cc    851 AGGATATGCTGGATCAGGAAAATCCATTTTAA    882


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