Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02354 and BSU14060

See Amino acid alignment / Visit BSNT_02354 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:04
# Commandline: needle
#    -asequence dna-align/BSNT_02354___ykuF.1.22522.seq
#    -bsequence dna-align/BSU14060___ykuF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02354___ykuF-BSU14060___ykuF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02354___ykuF-BSU14060___ykuF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02354___ykuF
# 2: BSU14060___ykuF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     765/765 (100.0%)
# Similarity:   765/765 (100.0%)
# Gaps:           0/765 ( 0.0%)
# Score: 3825.0
# 
#
#=======================================

BSNT_02354___      1 ATGGAAAAAAAGGCGGTAATTATTACCGGCGGGTCAAGCGGCATGGGAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk      1 ATGGAAAAAAAGGCGGTAATTATTACCGGCGGGTCAAGCGGCATGGGAAA     50

BSNT_02354___     51 AGCGATGGCAAAAAAACAGGCTGAATTAGGGTGGCACGTTATGGTGACAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk     51 AGCGATGGCAAAAAAACAGGCTGAATTAGGGTGGCACGTTATGGTGACAG    100

BSNT_02354___    101 GGAGGAACCATGAGGCACTTGAGGAAACAAAAAAAGAAATTCAGACCTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    101 GGAGGAACCATGAGGCACTTGAGGAAACAAAAAAAGAAATTCAGACCTTT    150

BSNT_02354___    151 GAGGGACAGGTCGCTTGTTTTCAAATGGATGTCCGTTCCGATTCCGCCGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    151 GAGGGACAGGTCGCTTGTTTTCAAATGGATGTCCGTTCCGATTCCGCCGC    200

BSNT_02354___    201 TTCAGACATGATTAAAGAAGCGGTAAAAGCCTTTGGCCGGCTTGACGCGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    201 TTCAGACATGATTAAAGAAGCGGTAAAAGCCTTTGGCCGGCTTGACGCGC    250

BSNT_02354___    251 TGATTAACAACGCGGCCGGAAACTTTATTTGTCCGGCAGAAAAGCTGACG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    251 TGATTAACAACGCGGCCGGAAACTTTATTTGTCCGGCAGAAAAGCTGACG    300

BSNT_02354___    301 CCCAATGGATGGAAAGCCGTTATTGAGATTGTTTTAAACGGCACATTTTT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    301 CCCAATGGATGGAAAGCCGTTATTGAGATTGTTTTAAACGGCACATTTTT    350

BSNT_02354___    351 TTGCAGCCAAGCAGCGGCAAGGCATTGGATTGACCAGAAGCAGCAGGGTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    351 TTGCAGCCAAGCAGCGGCAAGGCATTGGATTGACCAGAAGCAGCAGGGTG    400

BSNT_02354___    401 TCATTTTAAATATGGCAGCCACGTACGCTTGGGGAGCGGGAGCGGGGGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    401 TCATTTTAAATATGGCAGCCACGTACGCTTGGGGAGCGGGAGCGGGGGTC    450

BSNT_02354___    451 GTTCATTCCGCTGCAGCCAAAGCGGGGGTATTGTCATTGACAAGAACGCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    451 GTTCATTCCGCTGCAGCCAAAGCGGGGGTATTGTCATTGACAAGAACGCT    500

BSNT_02354___    501 GGCCGTTGAATGGGGGAGCAAATACGGCATTCGTACAAACGCGATAGCCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    501 GGCCGTTGAATGGGGGAGCAAATACGGCATTCGTACAAACGCGATAGCCC    550

BSNT_02354___    551 CCGGACCGATTGAACGAACAGGCGGTGCGGAGAAGCTATTTGAATCGGAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    551 CCGGACCGATTGAACGAACAGGCGGTGCGGAGAAGCTATTTGAATCGGAA    600

BSNT_02354___    601 AAAGCGATGGCCCGCACGATGAACAGTGTGCCGCTCGGCCGATTGGGCAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    601 AAAGCGATGGCCCGCACGATGAACAGTGTGCCGCTCGGCCGATTGGGCAC    650

BSNT_02354___    651 ACCGGAGGAAATCGCCGCTTTGGCAGCGTTTTTGCTTTCTGATGAAGCAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    651 ACCGGAGGAAATCGCCGCTTTGGCAGCGTTTTTGCTTTCTGATGAAGCAT    700

BSNT_02354___    701 CCTATATAAACGGGGATTGTATCACAATGGACGGGGGGCAATGGCTGAAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU14060___yk    701 CCTATATAAACGGGGATTGTATCACAATGGACGGGGGGCAATGGCTGAAT    750

BSNT_02354___    751 CCTTATCCGTTTTAA    765
                     |||||||||||||||
BSU14060___yk    751 CCTTATCCGTTTTAA    765


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