Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02337 and BSU13960

See Amino acid alignment / Visit BSNT_02337 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:20:01
# Commandline: needle
#    -asequence dna-align/BSNT_02337___ykwC.1.22522.seq
#    -bsequence dna-align/BSU13960___ykwC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02337___ykwC-BSU13960___ykwC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02337___ykwC-BSU13960___ykwC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02337___ykwC
# 2: BSU13960___ykwC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 867
# Identity:     855/867 (98.6%)
# Similarity:   855/867 (98.6%)
# Gaps:           0/867 ( 0.0%)
# Score: 4227.0
# 
#
#=======================================

BSNT_02337___      1 TTGAAAAAAACAATTGGTTTTATCGGTCTTGGAGTGATGGGAAAGAGCAT     50
                     |||||||||||||||||||||||||||||||||||.||||||||.|||||
BSU13960___yk      1 TTGAAAAAAACAATTGGTTTTATCGGTCTTGGAGTAATGGGAAAAAGCAT     50

BSNT_02337___     51 GGCATCACATATTCTGAATGACGGCCACCCTGTTTTGGTGTACACCCGGA    100
                     |||||||||||||||.|||||||||||.|||||.||||||||||||||||
BSU13960___yk     51 GGCATCACATATTCTCAATGACGGCCATCCTGTATTGGTGTACACCCGGA    100

BSNT_02337___    101 CAAAAGAAAAAGCAGAAAGCATACTTCAAAAAGGCGCGATCTGGAAAGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    101 CAAAAGAAAAAGCAGAAAGCATACTTCAAAAAGGCGCGATCTGGAAAGAT    150

BSNT_02337___    151 ACGGTCAAAGATCTTTCGAAAGAAGCGGATGTCATCATTACAATGGTCGG    200
                     ||||||||||||||||||||||||||||||||.|||||.|||||||||||
BSU13960___yk    151 ACGGTCAAAGATCTTTCGAAAGAAGCGGATGTTATCATCACAATGGTCGG    200

BSNT_02337___    201 CTATCCCAGTGATGTTGAAGAAGTGTATTTCGGAAGCAATGGAATTATTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    201 CTATCCCAGTGATGTTGAAGAAGTGTATTTCGGAAGCAATGGAATTATTG    250

BSNT_02337___    251 AAAACGCAAAAGAAGGCGCATATCTTATTGATATGACGACATCTAAGCCT    300
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU13960___yk    251 AAAACGCAAAAGAAGGTGCATATCTTATTGATATGACGACATCTAAGCCT    300

BSNT_02337___    301 TCGCTTGCGAAGAAGATTGCTGAAGCGGCCAAAGAAAAAGCATTGTTCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    301 TCGCTTGCGAAGAAGATTGCTGAAGCGGCCAAAGAAAAAGCATTGTTCGC    350

BSNT_02337___    351 TTTAGACGCTCCTGTTTCCGGTGGAGACGTCGGTGCACAAAACGGAACAC    400
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU13960___yk    351 TTTAGACGCTCCTGTTTCCGGTGGAGACATCGGTGCACAAAACGGAACAC    400

BSNT_02337___    401 TCGCGATTATGGTCGGTGGAGAAAAAGAAGCTTTTGAAGCCTGCATGCCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    401 TCGCGATTATGGTCGGTGGAGAAAAAGAAGCTTTTGAAGCCTGCATGCCG    450

BSNT_02337___    451 ATTTTCTCTTTAATGGGAGAGAATATTCAGTATCAAGGATCGGCTGGAAG    500
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU13960___yk    451 ATTTTCTCTTTAATGGGAGAGAATATTCAGTATCAAGGACCGGCTGGAAG    500

BSNT_02337___    501 CGGACAGCATACCAAGATGTGCAATCAGATTGCAATTGCAGCCGGTATGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    501 CGGACAGCATACCAAGATGTGCAATCAGATTGCAATTGCAGCCGGTATGA    550

BSNT_02337___    551 TCGGTGTTGCTGAAGCGATGGCTTATGCCCAAAAATCAGGTCTAGAGCCG    600
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU13960___yk    551 TCGGTGTTGCTGAAGCGATGGCTTATGCCCAAAAATCAGGCCTAGAGCCG    600

BSNT_02337___    601 GAAAATGTTCTGAAAAGCATCACAACGGGCGCAGCCGGAAGCTGGTCATT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    601 GAAAATGTTCTGAAAAGCATCACAACGGGCGCAGCCGGAAGCTGGTCATT    650

BSNT_02337___    651 GTCAAATCTTGCTCCCCGTATGCTGCAAGGCAACTTTGAACCGGGATTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    651 GTCAAATCTTGCTCCCCGTATGCTGCAAGGCAACTTTGAACCGGGATTTT    700

BSNT_02337___    701 ATGTGAAGCATTTTATTAAGGATATGGGAATTGCACTAGAGGAAGCAGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    701 ATGTGAAGCATTTTATTAAGGATATGGGAATTGCACTAGAGGAAGCAGAA    750

BSNT_02337___    751 TTAATGGGGGAAGAAATGCCAGGCTTGTCGCTCGCAAAATCCTTATATGA    800
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU13960___yk    751 TTAATGGGGGAAGAAATGCCAGGCTTGTCGCTCGCAAAATCTTTATATGA    800

BSNT_02337___    801 CAAGCTAGCTGCTCAAGGTGAAGAAAACAGCGGAACACAGAGTATATATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13960___yk    801 CAAGCTAGCTGCTCAAGGTGAAGAAAACAGCGGAACACAGAGTATATATA    850

BSNT_02337___    851 AGCTTTGGGTGAAATAA    867
                     |||||||||||||||||
BSU13960___yk    851 AGCTTTGGGTGAAATAA    867


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02337 and BSU13960

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
