Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02330 and BSU13900

See Amino acid alignment / Visit BSNT_02330 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:59
# Commandline: needle
#    -asequence dna-align/BSNT_02330___ptsH.1.22522.seq
#    -bsequence dna-align/BSU13900___ptsH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02330___ptsH-BSU13900___ptsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02330___ptsH-BSU13900___ptsH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02330___ptsH
# 2: BSU13900___ptsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 267
# Identity:     266/267 (99.6%)
# Similarity:   266/267 (99.6%)
# Gaps:           0/267 ( 0.0%)
# Score: 1326.0
# 
#
#=======================================

BSNT_02330___      1 ATGGCACAAAAAACATTTAAAGTAACTGCAGATTCTGGAATCCATGCTCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13900___pt      1 ATGGCACAAAAAACATTTAAAGTAACTGCAGATTCTGGAATCCATGCTCG     50

BSNT_02330___     51 TCCTGCGACAGTTCTTGTTCAAACTGCTAGCAAATACGACGCTGACGTTA    100
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU13900___pt     51 TCCTGCGACAGTTCTTGTACAAACTGCTAGCAAATACGACGCTGACGTTA    100

BSNT_02330___    101 ATTTAGAATATAACGGCAAAACAGTTAACCTTAAATCTATTATGGGTGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13900___pt    101 ATTTAGAATATAACGGCAAAACAGTTAACCTTAAATCTATTATGGGTGTT    150

BSNT_02330___    151 ATGTCTTTAGGTATCGCTAAAGGCGCTGAGATCACAATCTCTGCTTCCGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13900___pt    151 ATGTCTTTAGGTATCGCTAAAGGCGCTGAGATCACAATCTCTGCTTCCGG    200

BSNT_02330___    201 AGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13900___pt    201 AGCTGACGAAAACGATGCTCTTAACGCTTTAGAAGAAACAATGAAAAGCG    250

BSNT_02330___    251 AAGGACTCGGCGAGTAA    267
                     |||||||||||||||||
BSU13900___pt    251 AAGGACTCGGCGAGTAA    267


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.