Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02310 and BSU13800

See Amino acid alignment / Visit BSNT_02310 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:57
# Commandline: needle
#    -asequence dna-align/BSNT_02310___ykvR.1.22522.seq
#    -bsequence dna-align/BSU13800___ykvR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02310___ykvR-BSU13800___ykvR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02310___ykvR-BSU13800___ykvR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02310___ykvR
# 2: BSU13800___ykvR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 291
# Identity:     288/291 (99.0%)
# Similarity:   288/291 (99.0%)
# Gaps:           0/291 ( 0.0%)
# Score: 1428.0
# 
#
#=======================================

BSNT_02310___      1 GTGAAGACATTGCGGTTAAACAATGTAACGTTAGAAATGGCTGCATATCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13800___yk      1 GTGAAGACATTGCGGTTAAACAATGTAACGTTAGAAATGGCTGCATATCA     50

BSNT_02310___     51 AGAGGAGAGCGAGCCGAAGCGAAAAATTGCATTTACCTTAAACGTTACGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13800___yk     51 AGAGGAGAGCGAGCCGAAGCGAAAAATTGCATTTACCTTAAACGTTACGA    100

BSNT_02310___    101 GTGAGACTTACCATGATATCGCTGTCCTGTTGTATGAAAAAACGTTTAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13800___yk    101 GTGAGACTTACCATGATATCGCTGTCCTGTTGTATGAAAAAACGTTTAAT    150

BSNT_02310___    151 GTCGAGGTTCCGGAACGCGGTCTTGCCTTCCGGGGGAAAATGACAAATTA    200
                     |||||||||||||||||||.||||||||||||||||.|||||||||||||
BSU13800___yk    151 GTCGAGGTTCCGGAACGCGATCTTGCCTTCCGGGGGGAAATGACAAATTA    200

BSNT_02310___    201 TTCAACATCATTGACCAACCTGTACGAACCGGGGGCCGTCAGCGAGTTCT    250
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU13800___yk    201 TTCAACATCATTGACCAACCTGTACGAACCAGGGGCCGTCAGCGAGTTCT    250

BSNT_02310___    251 ATATAGAAATAACGGAAATAGACAAAAACGCCGATTCATGA    291
                     |||||||||||||||||||||||||||||||||||||||||
BSU13800___yk    251 ATATAGAAATAACGGAAATAGACAAAAACGCCGATTCATGA    291


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