Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02309 and BSU13750

See Amino acid alignment / Visit BSNT_02309 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:57
# Commandline: needle
#    -asequence dna-align/BSNT_02309___ykvM.1.22522.seq
#    -bsequence dna-align/BSU13750___ykvM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02309___ykvM-BSU13750___ykvM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02309___ykvM-BSU13750___ykvM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02309___ykvM
# 2: BSU13750___ykvM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 498
# Identity:     485/498 (97.4%)
# Similarity:   485/498 (97.4%)
# Gaps:           0/498 ( 0.0%)
# Score: 2373.0
# 
#
#=======================================

BSNT_02309___      1 ATGACGACAAGAAAAGAATCAGAATTAGAAGGTGTAACATTGTTAGGCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU13750___yk      1 ATGACGACAAGAAAAGAATCAGAATTAGAAGGTGTAACATTGCTAGGCAA     50

BSNT_02309___     51 CCAAGGTACAAATTATTTGTTCGAATATGCACCGGACGTGCTGGAATCCT    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU13750___yk     51 TCAAGGTACAAATTATTTGTTCGAATATGCACCGGACGTGCTGGAATCCT    100

BSNT_02309___    101 TCCCGAATAAACATGTAAACCGTGATTACTTTGTAAAATTCAATTGTCCG    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||.|||
BSU13750___yk    101 TCCCTAATAAACATGTAAACCGTGATTACTTTGTAAAATTCAATTGCCCG    150

BSNT_02309___    151 GAATTCACATCTTTATGTCCTAAAACAGGACAGCCTGACTTTGCGACAAT    200
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU13750___yk    151 GAATTCACATCTTTATGTCCTAAAACAGGCCAGCCTGACTTTGCGACAAT    200

BSNT_02309___    201 CTACATCAGCTACATTCCTGATGAAAAAATGGTTGAAAGCAAATCATTAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13750___yk    201 CTACATCAGCTACATTCCTGATGAAAAAATGGTTGAAAGCAAATCATTAA    250

BSNT_02309___    251 AGCTGTATCTATTCAGCTTCAGAAACCATGGTGACTTCCACGAAGACTGC    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU13750___yk    251 AGCTGTATCTATTCAGCTTCAGAAACCATGGTGACTTCCACGAGGACTGC    300

BSNT_02309___    301 ATGAACATCATCATGAATGACTTGATTGAATTAATGGACCCGCGCTACAT    350
                     |||||.|||||||||||.||||||||||||||||||||||||||||||||
BSU13750___yk    301 ATGAATATCATCATGAACGACTTGATTGAATTAATGGACCCGCGCTACAT    350

BSNT_02309___    351 CGAAGTATGGGGCAAATTCACGCCAAGAGGCGGAATTTCCATTGACCCGT    400
                     .||||||||||||||||||||||||||||||||||||||||||||.||||
BSU13750___yk    351 TGAAGTATGGGGCAAATTCACGCCAAGAGGCGGAATTTCCATTGATCCGT    400

BSNT_02309___    401 ACACTAACTACGGAAAGCCTGGCACGAAGTATGAAAAAATGGCCGAATAC    450
                     ||||.|||||||||||||||||||||||||||||.|||||||||||||||
BSU13750___yk    401 ACACAAACTACGGAAAGCCTGGCACGAAGTATGAGAAAATGGCCGAATAC    450

BSNT_02309___    451 CGTATGATGAACCATGATTTGTATCCGGAGACGATTGATAATCGTTAA    498
                     ||||||||||||||||||||||||||||||||.|||||||||||||||
BSU13750___yk    451 CGTATGATGAACCATGATTTGTATCCGGAGACAATTGATAATCGTTAA    498


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