Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02276 and BSU13520

See Amino acid alignment / Visit BSNT_02276 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:53
# Commandline: needle
#    -asequence dna-align/BSNT_02276___ykrP.1.22522.seq
#    -bsequence dna-align/BSU13520___ykrP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02276___ykrP-BSU13520___ykrP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02276___ykrP-BSU13520___ykrP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02276___ykrP
# 2: BSU13520___ykrP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1023
# Identity:    1015/1023 (99.2%)
# Similarity:  1015/1023 (99.2%)
# Gaps:           0/1023 ( 0.0%)
# Score: 5043.0
# 
#
#=======================================

BSNT_02276___      1 ATGAGTAAATCGCGGGACAGTTATTTCGATAACGCAAAATTTTTATTGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk      1 ATGAGTAAATCGCGGGACAGTTATTTCGATAACGCAAAATTTTTATTGAT     50

BSNT_02276___     51 ATTCCTTGTTGTATTCGGTCATATCCTTCGTTCCTTTATTAATGATAATC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk     51 ATTCCTTGTTGTATTCGGTCATATCCTTCGTTCCTTTATTAATGATAATC    100

BSNT_02276___    101 ATTTTATGCTCTACCTCTACAAGTTCATTTACACATTCCATATGCCTGCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    101 ATTTTATGCTCTACCTCTACAAGTTCATTTACACATTCCATATGCCTGCA    150

BSNT_02276___    151 TTTATTCTTGTATCCGGTTATTTCGCGAAAGGCTTTAAACGGGCGGGATA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    151 TTTATTCTTGTATCCGGTTATTTCGCGAAAGGCTTTAAACGGGCGGGATA    200

BSNT_02276___    201 TGTAAAAAAGCTGGCGGTCAAGCTGATTATTCCGTATTTGATTTTCCAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    201 TGTAAAAAAGCTGGCGGTCAAGCTGATTATTCCGTATTTGATTTTCCAAA    250

BSNT_02276___    251 TCATTTATTCCGTCTTTTATTACATTATGCAAGATGAAAGCATGGCAAAT    300
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    251 TTATTTATTCCGTCTTTTATTACATTATGCAAGATGAAAGCATGGCAAAT    300

BSNT_02276___    301 GTGAACCCGATTGATCCGCAATGGTCGTTATGGTTTCTTGTAAGCTTATT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    301 GTGAACCCGATTGATCCGCAATGGTCGTTATGGTTTCTTGTAAGCTTATT    350

BSNT_02276___    351 CTTTTGGAACCTGCTCCTATATCCTTTTTCAAAAGTTTCAAAGCAGTGGG    400
                     |||||||||||||||||||||||||||||||||..|||||||||||||||
BSU13520___yk    351 CTTTTGGAACCTGCTCCTATATCCTTTTTCAAAGCTTTCAAAGCAGTGGG    400

BSNT_02276___    401 CGCTGTTTGTCAGCTGCGGAATCGCCGTGCTGATCGGTTATCTGGACTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    401 CGCTGTTTGTCAGCTGCGGAATCGCCGTGCTGATCGGTTATCTGGACTTT    450

BSNT_02276___    451 GTCAGCAGCACGCTGAGCTTGTCACGGACATTCGTATTCTTACCGATGTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    451 GTCAGCAGCACGCTGAGCTTGTCACGGACATTCGTATTCTTACCGATGTT    500

BSNT_02276___    501 CCTTGTCGGTTTTTATTTAAATAAACATCATTTTGATTTATTGAGATCGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU13520___yk    501 CCTTGTCGGTTTTTATTTAAATAAACATCATTTTGATTTATTGAGATCAA    550

BSNT_02276___    551 AACGCGGCAAACAAATTGCGCTCGGAGTGCTTGCCGCAGTATTCGTCATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    551 AACGCGGCAAACAAATTGCGCTCGGAGTGCTTGCCGCAGTATTCGTCATC    600

BSNT_02276___    601 TGCTGGGGCATCGATTTTGACTATTCTTTTCTGTTTGGTTCAAAACCGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    601 TGCTGGGGCATCGATTTTGACTATTCTTTTCTGTTTGGTTCAAAACCGTA    650

BSNT_02276___    651 TTCTTCATTTGGAGACGTTACCCTGGTAAGCGGACTATCCCGAATCGGCT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    651 TTCTTCATTTGGAGACGTTACCCTGGTAAGCGGACTATCCCGAATCGGCT    700

BSNT_02276___    701 GGTATGTACTCGCCTTTGGGGCAACCTTCAGCTTTTTAGCGCTTGTTCCG    750
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU13520___yk    701 GGTATGTACTCGCCTTTGGGGCAACCTTCAGCTTTTTAGCGCTCGTTCCG    750

BSNT_02276___    751 CAAAAACGGTATTTCTTTACCAAATGGGGAACCCGGACATTTTACGTGTA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    751 CAAAAACGGTATTTCTTTACCAAATGGGGAACCCGGACATTTTACGTGTA    800

BSNT_02276___    801 TCTGCTTCACGGGTTTATTATTAAGACATTACGACAGGTCGGGCTTGAGG    850
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU13520___yk    801 TCTGCTTCACGGGTTTATTATTAAGACATTACGGCAGGTCGGGCTTGAGG    850

BSNT_02276___    851 ATTGGCTTACTGACTATCAAAGCTTAGTGATCCTCTTGCTTTTAACAGCA    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    851 ATTGGCTTACTGACTATCAAAGCTTAGTGATCCTCTTGCTTTTAACAGCA    900

BSNT_02276___    901 GCCCTGACATCAGTCCTCTCCAGCAACTTTGTTAAGACAGTCGCTCAGCC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13520___yk    901 GCCCTGACATCAGTCCTCTCCAGCAACTTTGTTAAGACAGTCGCTCAGCC    950

BSNT_02276___    951 CTTCATTGAGCTGAGGATGACCAGCTTATTGCAATTTGTCAGAGGAACGG   1000
                     .||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13520___yk    951 ATTCATTGAGCTGAGGATGACAAGCTTATTGCAATTTGTCAGAGGAACGG   1000

BSNT_02276___   1001 GCAAAAATGCTTATTTAAAATAG   1023
                     |||||||||||||||||||||||
BSU13520___yk   1001 GCAAAAATGCTTATTTAAAATAG   1023


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02276 and BSU13520

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
