Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_02267 and BSU13470

See Amino acid alignment / Visit BSNT_02267 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:52
# Commandline: needle
#    -asequence dna-align/BSNT_02267___sspD.1.22522.seq
#    -bsequence dna-align/BSU13470___sspD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02267___sspD-BSU13470___sspD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02267___sspD-BSU13470___sspD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02267___sspD
# 2: BSU13470___sspD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 195
# Identity:     195/195 (100.0%)
# Similarity:   195/195 (100.0%)
# Gaps:           0/195 ( 0.0%)
# Score: 975.0
# 
#
#=======================================

BSNT_02267___      1 ATGGCGAGCAGAAATAAACTCGTTGTTCCAGGGGTGGAGCAGGCACTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13470___ss      1 ATGGCGAGCAGAAATAAACTCGTTGTTCCAGGGGTGGAGCAGGCACTAGA     50

BSNT_02267___     51 CCAATTTAAACTCGAAGTGGCTCAAGAATTCGGTGTGAACCTTGGTTCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13470___ss     51 CCAATTTAAACTCGAAGTGGCTCAAGAATTCGGTGTGAACCTTGGTTCTG    100

BSNT_02267___    101 ATACAGTCGCACGCGCTAACGGCTCTGTAGGCGGAGAAATGACAAAGCGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13470___ss    101 ATACAGTCGCACGCGCTAACGGCTCTGTAGGCGGAGAAATGACAAAGCGG    150

BSNT_02267___    151 CTGGTACAGCAAGCACAATCACAATTAAATGGCACAACTAAATAA    195
                     |||||||||||||||||||||||||||||||||||||||||||||
BSU13470___ss    151 CTGGTACAGCAAGCACAATCACAATTAAATGGCACAACTAAATAA    195


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.