Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02261 and BSU13440

See Amino acid alignment / Visit BSNT_02261 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:52
# Commandline: needle
#    -asequence dna-align/BSNT_02261___ykoY.1.22522.seq
#    -bsequence dna-align/BSU13440___ykoY.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02261___ykoY-BSU13440___ykoY.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02261___ykoY-BSU13440___ykoY.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02261___ykoY
# 2: BSU13440___ykoY
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 975
# Identity:     968/975 (99.3%)
# Similarity:   968/975 (99.3%)
# Gaps:           0/975 ( 0.0%)
# Score: 4812.0
# 
#
#=======================================

BSNT_02261___      1 ATGTATTCCGGAAACAAAGTCGTCATTTCATGGATTGTATCCATCGGCTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk      1 ATGTATTCCGGAAACAAAGTCGTCATTTCATGGATTGTATCCATCGGCTT     50

BSNT_02261___     51 TGTTGGCATGCCTGAATTCATGTCTAGCAAGACCTTTGCCTTATGTCGGC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk     51 TGTTGGCATGCCTGAATTCATGTCTAGCAAGACCTTTGCCTTATGTCGGC    100

BSNT_02261___    101 AAAGGTCTTTTTTGCATGGTCCGGCCGGCATAAGATCGGATGAAGAGAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    101 AAAGGTCTTTTTTGCATGGTCCGGCCGGCATAAGATCGGATGAAGAGAAA    150

BSNT_02261___    151 GAAAACAACTTTTTTGGGAGGGTATCATTTATGGATGCAGCATTATTATT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    151 GAAAACAACTTTTTTGGGAGGGTATCATTTATGGATGCAGCATTATTATT    200

BSNT_02261___    201 AGAGTATGGTTGGGTTCTTCTCGTCTTGATCGGGCTGGAAGGGATTTTAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    201 AGAGTATGGTTGGGTTCTTCTCGTCTTGATCGGGCTGGAAGGGATTTTAG    250

BSNT_02261___    251 CCGCCGATAACGCGCTGGTTATGGCGGTAATGGTAAAACATTTGCCGGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    251 CCGCCGATAACGCGCTGGTTATGGCGGTAATGGTAAAACATTTGCCGGAG    300

BSNT_02261___    301 GAAAAAAGAAAAAAAGCGTTATTTTATGGATTGGCAGGGGCTTTTGTTCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    301 GAAAAAAGAAAAAAAGCGTTATTTTATGGATTGGCAGGGGCTTTTGTTCT    350

BSNT_02261___    351 GCGATTTGGCTCTTTATTCGCCATTTCATTTTTGGTCAACGTATGGCAGG    400
                     ||||||||||||||||||.||.|||||.||.|||||||||||||||||||
BSU13440___yk    351 GCGATTTGGCTCTTTATTTGCAATTTCTTTCTTGGTCAACGTATGGCAGG    400

BSNT_02261___    401 TTCAAGCGATTGGCGCGATCTATTTGCTGTATATCTCAGCAAGCCACTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    401 TTCAAGCGATTGGCGCGATCTATTTGCTGTATATCTCAGCAAGCCACTTA    450

BSNT_02261___    451 TTGAAAAGATATGTATTTAAGAAAGAAGACACACATAAAGAGACGAAGCA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    451 TTGAAAAGATATGTATTTAAGAAAGAAGACACACATAAAGAGACGAAGCA    500

BSNT_02261___    501 AAGCGGTTTTTGGCCGACTGTTTTAAAAGTTGAACTGGCAGATATCGCGT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    501 AAGCGGTTTTTGGCCGACTGTTTTAAAAGTTGAACTGGCAGATATCGCGT    550

BSNT_02261___    551 TTGCTGTTGATTCCATCTTAGCAGCAGTAGCGCTGGCGGTTACACTTCCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    551 TTGCTGTTGATTCCATCTTAGCAGCAGTAGCGCTGGCGGTTACACTTCCT    600

BSNT_02261___    601 GGGACATCACTCCCGAAGATCGGCGGACTTGACGGAGGACAATTTCTCGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    601 GGGACATCACTCCCGAAGATCGGCGGACTTGACGGAGGACAATTTCTCGT    650

BSNT_02261___    651 CATTTTGGCCGGCGGTATCATCGGACTGGTGATCATGCGGTTTGCGGCTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    651 CATTTTGGCCGGCGGTATCATCGGACTGGTGATCATGCGGTTTGCGGCTT    700

BSNT_02261___    701 CCATGTTTGTGAAGTTATTAAAGGAACGTCCAAGCCTAGAAACAGCAGCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    701 CCATGTTTGTGAAGTTATTAAAGGAACGTCCAAGCCTAGAAACAGCAGCC    750

BSNT_02261___    751 TTTGTGATTGTCGGCTGGGTCGGAGTGAAGCTTGCTTTATATACGCTTGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    751 TTTGTGATTGTCGGCTGGGTCGGAGTGAAGCTTGCTTTATATACGCTTGC    800

BSNT_02261___    801 CCATCGCGACATAGCGGTTGTTTCTGAGCACTTTATTCATTCTGGAACAT    850
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU13440___yk    801 CCATCGCGACATAGCGGTTGTTTCTGAGCACTTTATCCATTCTGGAACAT    850

BSNT_02261___    851 GGAAGCTGATATTCTGGGGTGTCTTAGCAGCAATCGCGGTTTGCGGCTGG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13440___yk    851 GGAAGCTGATATTCTGGGGTGTCTTAGCAGCAATCGCGGTTTGCGGCTGG    900

BSNT_02261___    901 TTTATGTCAGGTGGGAAAAAACAGCCGGAGGGCGCACAAAACGAACAAAG    950
                     ||||||||||||||||||||||||||||||||.||||||||||||||||.
BSU13440___yk    901 TTTATGTCAGGTGGGAAAAAACAGCCGGAGGGTGCACAAAACGAACAAAA    950

BSNT_02261___    951 AAACAGCACCCGTGAACGGGCGTAA    975
                     |||||||||||||||||||||||||
BSU13440___yk    951 AAACAGCACCCGTGAACGGGCGTAA    975


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02261 and BSU13440

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
