Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02249 and BSU13390

See Amino acid alignment / Visit BSNT_02249 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:50
# Commandline: needle
#    -asequence dna-align/BSNT_02249___ykoT.1.22522.seq
#    -bsequence dna-align/BSU13390___ykoT.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02249___ykoT-BSU13390___ykoT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02249___ykoT-BSU13390___ykoT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02249___ykoT
# 2: BSU13390___ykoT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1014
# Identity:    1007/1014 (99.3%)
# Similarity:  1007/1014 (99.3%)
# Gaps:           0/1014 ( 0.0%)
# Score: 5007.0
# 
#
#=======================================

BSNT_02249___      1 TTGAAACAGTCACAGCCAGTATTAACCATCGTCGTCCCGTGTTTCAATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk      1 TTGAAACAGTCACAGCCAGTATTAACCATCGTCGTCCCGTGTTTCAATGA     50

BSNT_02249___     51 AGAGGAAGTGTTTCAAGAAACAAGCCGTCAGCTGACAGAGGTTGTAGATG    100
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU13390___yk     51 AGAGGAAGTGTTTCAAGAAACAAGCCATCAGCTGACAGAGGTTGTAGATG    100

BSNT_02249___    101 ATTTAATTGAAGAAAAATTAATTGCTGAAGACAGTAAAATTCTGTTTGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    101 ATTTAATTGAAGAAAAATTAATTGCTGAAGACAGTAAAATTCTGTTTGTC    150

BSNT_02249___    151 GATGATGGCAGCAAAGACCGCACTTGGGCTTTGATTGCTATGGAGAGCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    151 GATGATGGCAGCAAAGACCGCACTTGGGCTTTGATTGCTATGGAGAGCAT    200

BSNT_02249___    201 AAGAAACAAGAAGGTTACCGGCTTAAAATTAGCCTGCAATGTCGGCCACC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    201 AAGAAACAAGAAGGTTACCGGCTTAAAATTAGCCTGCAATGTCGGCCACC    250

BSNT_02249___    251 AAAAAGCGCTTTTAGCCGGACTGCATAAAGCGAAGAATAGGTCAGACTGC    300
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU13390___yk    251 AAAAAGCGCTTTTAGCCGGATTGCATAAAGCGAAGAATAGGTCAGACTGC    300

BSNT_02249___    301 GTCATTTCGATCGATGCCGATCTTCAGGACGATATCTCTGTGATCCGGGA    350
                     |||||||||||||||||.||||||||||||||.|||||||||||||||||
BSU13390___yk    301 GTCATTTCGATCGATGCTGATCTTCAGGACGACATCTCTGTGATCCGGGA    350

BSNT_02249___    351 TTTTATGCTGAAATATCATAAGGGCTGCGAGATCGTTTACGGTGTACGCC    400
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU13390___yk    351 TTTTATGCTGAAATATCATGAGGGCTGCGAGATCGTTTACGGTGTACGCC    400

BSNT_02249___    401 GGAGCAGAAAAACCGATACCTTTTTCAAGCGCACGACAGCGTTAGGGTTT    450
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU13390___yk    401 GGAGCAGAAAAACCGATACCTTTTTCAAGCGCACGACCGCGTTAGGGTTT    450

BSNT_02249___    451 TATCGTCTCATGAATAAGCTTGGGATTAAATTAATTTATAATCATGCTGA    500
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU13390___yk    451 TATCGTCTCATGAATAAACTTGGGATTAAATTAATTTATAATCATGCTGA    500

BSNT_02249___    501 TTTTCGTTTAATGAATAAAAGGTCCCTTGAAGAGCTTGAGCGTTATCCGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    501 TTTTCGTTTAATGAATAAAAGGTCCCTTGAAGAGCTTGAGCGTTATCCGG    550

BSNT_02249___    551 AAGCGAATCTGTTTTTAAGAGGTATTGTCCCCATGATCGGCTTTAAATCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    551 AAGCGAATCTGTTTTTAAGAGGTATTGTCCCCATGATCGGCTTTAAATCG    600

BSNT_02249___    601 GCCGAAGTTTTGTATGACCGCAAGGAACGCTTTGCCGGCAAAACGAAATA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    601 GCCGAAGTTTTGTATGACCGCAAGGAACGCTTTGCCGGCAAAACGAAATA    650

BSNT_02249___    651 TCCGCTGAAAAAGATGCTATCCTTCGCTTTTAACGGGATTACTTCATTCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    651 TCCGCTGAAAAAGATGCTATCCTTCGCTTTTAACGGGATTACTTCATTCA    700

BSNT_02249___    701 GTGTCGCACCAATTCGATTCTTTACGCTTTTAGGGTTTGTTTTGTTTTTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    701 GTGTCGCACCAATTCGATTCTTTACGCTTTTAGGGTTTGTTTTGTTTTTC    750

BSNT_02249___    751 CTCAGCGCTGTGGCAGGGATTGGCGCGTTTATTCAAAAGCTGCTCGGCCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    751 CTCAGCGCTGTGGCAGGGATTGGCGCGTTTATTCAAAAGCTGCTCGGCCA    800

BSNT_02249___    801 TACGAATGCAGGCTGGGCGTCTCTTATCATATCCATTTGGTTTTTGGGCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    801 TACGAATGCAGGCTGGGCGTCTCTTATCATATCCATTTGGTTTTTGGGCG    850

BSNT_02249___    851 GGCTGCAATTGATGGGAATTGGAATCATCGGAGAGTATATTGGAACGATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    851 GGCTGCAATTGATGGGAATTGGAATCATCGGAGAGTATATTGGAACGATT    900

BSNT_02249___    901 TTTTCTGAAGTGAAAAGACGGCCGAAATACGCGATTGATATTGATTTGTA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    901 TTTTCTGAAGTGAAAAGACGGCCGAAATACGCGATTGATATTGATTTGTA    950

BSNT_02249___    951 TAATGAACAGCTGAGCCCGCTTCAGCGCCAGGAAAAAGAGCGGTTAGAAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13390___yk    951 TAATGAACAGCTGAGCCCGCTTCAGCGCCAGGAAAAAGAGCGGTTAGAAA   1000

BSNT_02249___   1001 AAAAGTACAGTTAA   1014
                     ||||||||||||||
BSU13390___yk   1001 AAAAGTACAGTTAA   1014


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02249 and BSU13390

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
