Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02242 and BSU13340

See Amino acid alignment / Visit BSNT_02242 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:49
# Commandline: needle
#    -asequence dna-align/BSNT_02242___ykoM.1.22522.seq
#    -bsequence dna-align/BSU13340___ykoM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02242___ykoM-BSU13340___ykoM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02242___ykoM-BSU13340___ykoM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02242___ykoM
# 2: BSU13340___ykoM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 465
# Identity:     464/465 (99.8%)
# Similarity:   464/465 (99.8%)
# Gaps:           0/465 ( 0.0%)
# Score: 2316.0
# 
#
#=======================================

BSNT_02242___      1 ATGATGAGATTATCGTTTAACGAAGAAGAAGTTGAGCGTGCGATGAATTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk      1 ATGATGAGATTATCGTTTAACGAAGAAGAAGTTGAGCGTGCGATGAATTT     50

BSNT_02242___     51 GTACAGAGTTTTTGCAAGGGCTTTCAAAAGTGTGTCCGAACATAGTATCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk     51 GTACAGAGTTTTTGCAAGGGCTTTCAAAAGTGTGTCCGAACATAGTATCC    100

BSNT_02242___    101 GTGATAGCAAAGAGCACGGTTTTAATCCCACTGAATTTGCTGTACTGGAG    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU13340___yk    101 GTGATAGCAAAGAGCACGGTTTTAATCCCACTGAATTTGCTGTACTGGAA    150

BSNT_02242___    151 CTCCTGTACACAAGAGGCCCGCAAAAATTACAGCAAATTGGGTCGAGACT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk    151 CTCCTGTACACAAGAGGCCCGCAAAAATTACAGCAAATTGGGTCGAGACT    200

BSNT_02242___    201 TCTGCTTGTAAGCGGAAACGTCACATATGTTATTGACAAACTAGAAAGAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk    201 TCTGCTTGTAAGCGGAAACGTCACATATGTTATTGACAAACTAGAAAGAA    250

BSNT_02242___    251 ACGGGTTTTTAGTAAGGGAGCAGGACCCGAAAGATAAACGCTCTGTTTAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk    251 ACGGGTTTTTAGTAAGGGAGCAGGACCCGAAAGATAAACGCTCTGTTTAC    300

BSNT_02242___    301 GCACATTTAACTGACAAGGGAAATGAGTATTTGGATAAAATTTATCCGAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk    301 GCACATTTAACTGACAAGGGAAATGAGTATTTGGATAAAATTTATCCGAT    350

BSNT_02242___    351 TCATGCACTGCGTATTGCGAGAGCGTTTTCAGGTCTTTCGCCTGATGAAC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk    351 TCATGCACTGCGTATTGCGAGAGCGTTTTCAGGTCTTTCGCCTGATGAAC    400

BSNT_02242___    401 AGGACCAGCTGATCGTCCTGCTCAAGAAAGCAGGCATACACAGCCAGCAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13340___yk    401 AGGACCAGCTGATCGTCCTGCTCAAGAAAGCAGGCATACACAGCCAGCAT    450

BSNT_02242___    451 TTGCTGTTTCGTTAA    465
                     |||||||||||||||
BSU13340___yk    451 TTGCTGTTTCGTTAA    465


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