Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02238 and BSU13310

See Amino acid alignment / Visit BSNT_02238 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:49
# Commandline: needle
#    -asequence dna-align/BSNT_02238___tnrA.1.22522.seq
#    -bsequence dna-align/BSU13310___tnrA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02238___tnrA-BSU13310___tnrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02238___tnrA-BSU13310___tnrA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02238___tnrA
# 2: BSU13310___tnrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     333/333 (100.0%)
# Similarity:   333/333 (100.0%)
# Gaps:           0/333 ( 0.0%)
# Score: 1665.0
# 
#
#=======================================

BSNT_02238___      1 ATGACCACAGAAGATCATTCTTATAAAGACAAAAAAGTGATTTCAATCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13310___tn      1 ATGACCACAGAAGATCATTCTTATAAAGACAAAAAAGTGATTTCAATCGG     50

BSNT_02238___     51 AATTGTGAGTGAATTGACAGGATTGTCCGTAAGACAGATCAGGTATTATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13310___tn     51 AATTGTGAGTGAATTGACAGGATTGTCCGTAAGACAGATCAGGTATTATG    100

BSNT_02238___    101 AGGAACGAAAGCTCATTTACCCGCAGCGTTCTTCAAGGGGGACAAGAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13310___tn    101 AGGAACGAAAGCTCATTTACCCGCAGCGTTCTTCAAGGGGGACAAGAAAA    150

BSNT_02238___    151 TACTCCTTTGCCGATGTGGAGCGGCTGATGGATATCGCCAATAAGCGTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13310___tn    151 TACTCCTTTGCCGATGTGGAGCGGCTGATGGATATCGCCAATAAGCGTGA    200

BSNT_02238___    201 AGACGGCGTACAGACGGCAGAGATTTTAAAGGATATGCGCAAAAAAGAAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13310___tn    201 AGACGGCGTACAGACGGCAGAGATTTTAAAGGATATGCGCAAAAAAGAAC    250

BSNT_02238___    251 AGATGTTAAAAAACGATCCGCAAGTGCGGAAAAAAATGCTGGAGGGGCAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13310___tn    251 AGATGTTAAAAAACGATCCGCAAGTGCGGAAAAAAATGCTGGAGGGGCAG    300

BSNT_02238___    301 CTTAATGCTCACTTTCGGTACAAAAACCGTTAA    333
                     |||||||||||||||||||||||||||||||||
BSU13310___tn    301 CTTAATGCTCACTTTCGGTACAAAAACCGTTAA    333


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