Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02235 and BSU13280

See Amino acid alignment / Visit BSNT_02235 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:48
# Commandline: needle
#    -asequence dna-align/BSNT_02235___ykoJ.1.22522.seq
#    -bsequence dna-align/BSU13280___ykoJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02235___ykoJ-BSU13280___ykoJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02235___ykoJ-BSU13280___ykoJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02235___ykoJ
# 2: BSU13280___ykoJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 513
# Identity:     508/513 (99.0%)
# Similarity:   508/513 (99.0%)
# Gaps:           0/513 ( 0.0%)
# Score: 2520.0
# 
#
#=======================================

BSNT_02235___      1 ATGCTCAAGAAAAAATGGATGGTCGGTCTTTTAGCAGGATGCCTAGCGGC     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU13280___yk      1 ATGCTCAAGAAAAAATGGATGGTCGGTCTTTTAGCAGGGTGCCTAGCGGC     50

BSNT_02235___     51 CGGAGGATTCAGCTACAACGCGTTTGCCAAAGAAAACAATGAAAACAGAC    100
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU13280___yk     51 CGGAGGATTCAGCTACAACGCGTTTGCCACAGAAAACAATGAAAACAGAC    100

BSNT_02235___    101 AGGCTTCTTCTAAGACGGATGCACTCACTGAACAAGAAGCAGAAGCAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13280___yk    101 AGGCTTCTTCTAAGACGGATGCACTCACTGAACAAGAAGCAGAAGCAATT    150

BSNT_02235___    151 GCTAAAACAGTTGTTGACGGCACAGTAGAAGACATTGACAGAGACCTTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13280___yk    151 GCTAAAACAGTTGTTGACGGCACAGTAGAAGACATTGACAGAGACCTTTA    200

BSNT_02235___    201 CAACGGCAAAGAAGTCTATGAAGTGGAGATTGAAAAAGAAGGTGAAGACT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13280___yk    201 CAACGGCAAAGAAGTCTATGAAGTGGAGATTGAAAAAGAAGGTGAAGACT    250

BSNT_02235___    251 ACGACGTTTATGTAGATATTCATACAAAACAAGCGCTTAATGACCCGCTA    300
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU13280___yk    251 ACGACGTTTATGTAGATATTCATACAAAACAAGCGCTTAATGACCCGTTA    300

BSNT_02235___    301 AAGGAGAAAGCAGAACAAGTCGCCATAACCAAAGAAGAAGCTGAAGAAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13280___yk    301 AAGGAGAAAGCAGAACAAGTCGCCATAACCAAAGAAGAAGCTGAAGAAAT    350

BSNT_02235___    351 TGCTTTAAAGCAAACAGGCGGAACCGTAACAGAAAGTAAGCTTGACGAAG    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU13280___yk    351 TGCTTTAAAGCAAACAGGTGGAACCGTAACAGAAAGTAAGCTTGACGAAG    400

BSNT_02235___    401 ATGACGGTGCTTACATCTATGAAATGGAAATCCAAACGAAACAAGGAACT    450
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU13280___yk    401 ATGACGGTGCTTACATCTATGAAATGGAAATCCAAACGAAGCAAGGAACT    450

BSNT_02235___    451 GAGACAGAATTTGAAATTTCCGCAAAAGATGGACGCATTATCAAACAGGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13280___yk    451 GAGACAGAATTTGAAATTTCCGCAAAAGATGGACGCATTATCAAACAGGA    500

BSNT_02235___    501 GATAGATGACTAA    513
                     |||||||||||||
BSU13280___yk    501 GATAGATGACTAA    513


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