Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02226 and BSU13230

See Amino acid alignment / Visit BSNT_02226 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:48
# Commandline: needle
#    -asequence dna-align/BSNT_02226___ykoE.1.22522.seq
#    -bsequence dna-align/BSU13230___thiV.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02226___ykoE-BSU13230___thiV.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02226___ykoE-BSU13230___thiV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02226___ykoE
# 2: BSU13230___thiV
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     594/600 (99.0%)
# Similarity:   594/600 (99.0%)
# Gaps:           0/600 ( 0.0%)
# Score: 2946.0
# 
#
#=======================================

BSNT_02226___      1 ATGAAAAGCTGGAAAGTAAAAGAAATTGTCATCATGTCCGTTATCAGTAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th      1 ATGAAAAGCTGGAAAGTAAAAGAAATTGTCATCATGTCCGTTATCAGTAT     50

BSNT_02226___     51 CGTATTTGCCGTTGTTTATTTATTATTTACACATTTCGGAAACGTGCTTG    100
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU13230___th     51 CGTATTTGCCGTTGTTTATTTATTATTTACACATTTCGGAAACGTACTTG    100

BSNT_02226___    101 CAGGTATGTTTGGGCCGATCGCCTATGAACCGATTTACGGCATTTGGTTT    150
                     ||||||||||||||||.||||||||||||||.||||||||||||||||||
BSU13230___th    101 CAGGTATGTTTGGGCCAATCGCCTATGAACCAATTTACGGCATTTGGTTT    150

BSNT_02226___    151 ATCGTTTCTGTGATCGCCGCGTACATGATTCGAAAACCGGGTGCGGCGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    151 ATCGTTTCTGTGATCGCCGCGTACATGATTCGAAAACCGGGTGCGGCGCT    200

BSNT_02226___    201 CGTTTCTGAAATCATTGCCGCTCTCGTTGAGTGCCTGCTGGGAAATCCGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    201 CGTTTCTGAAATCATTGCCGCTCTCGTTGAGTGCCTGCTGGGAAATCCGT    250

BSNT_02226___    251 CTGGCCCGATGGTCATCGTCATTGGCATTGTTCAAGGGCTCGGGGCTGAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    251 CTGGCCCGATGGTCATCGTCATTGGCATTGTTCAAGGGCTCGGGGCTGAG    300

BSNT_02226___    301 GCTGTGTTTCTTGCAACACGCTGGAAAGCATACTCTCTCCCTGTCCTTAT    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    301 GCTGTATTTCTTGCAACACGCTGGAAAGCATACTCTCTCCCTGTCCTTAT    350

BSNT_02226___    351 GCTGGCCGGTATGGGGTCTTCAGTAGCCAGCTTTATCTATGATCTCTTTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    351 GCTGGCCGGTATGGGGTCTTCAGTAGCCAGCTTTATCTATGATCTCTTTG    400

BSNT_02226___    401 TTTCTGGCTATGCAGCCTATTCACCAGGTTATCTGCTCATTATGCTTGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    401 TTTCTGGCTATGCAGCCTATTCACCAGGTTATCTGCTCATTATGCTTGTG    450

BSNT_02226___    451 ATCCGTCTCATTTCCGGCGCGCTTTTGGCGGGGCTTCTCGGAAAAGCTGT    500
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    451 ATCCGCCTCATTTCCGGCGCGCTTTTGGCGGGGCTTCTCGGAAAAGCTGT    500

BSNT_02226___    501 TAGCGACTCTCTCGCTTATACAGGTGTGTTAAACGGAATGGCACTCGGAA    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    501 CAGCGACTCTCTCGCTTATACAGGTGTGTTAAACGGAATGGCACTCGGAA    550

BSNT_02226___    551 AGGAACTGAAAAAGAAACGGAAGCGGGCGTCAGAACATGCAAGCCTTTGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13230___th    551 AGGAACTGAAAAAGAAACGGAAGCGGGCGTCAGAACATGCAAGCCTTTGA    600


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