Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_02220 and BSU13190

See Amino acid alignment / Visit BSNT_02220 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:47
# Commandline: needle
#    -asequence dna-align/BSNT_02220___ispA.1.22522.seq
#    -bsequence dna-align/BSU13190___ispA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02220___ispA-BSU13190___ispA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02220___ispA-BSU13190___ispA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02220___ispA
# 2: BSU13190___ispA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 960
# Identity:     954/960 (99.4%)
# Similarity:   954/960 (99.4%)
# Gaps:           0/960 ( 0.0%)
# Score: 4746.0
# 
#
#=======================================

BSNT_02220___      1 ATGAATGGTGAAATCCGCTTGATCCCGTATGTGACGAATGAGCAGATCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is      1 ATGAATGGTGAAATCCGCTTGATCCCGTATGTGACGAATGAGCAGATCAT     50

BSNT_02220___     51 GGATGTAAACGAGCTTCCTGAGGGCATTAAAGTGATTAAGGCGCCAGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is     51 GGATGTAAACGAGCTTCCTGAGGGCATTAAAGTGATTAAGGCGCCAGAAA    100

BSNT_02220___    101 TGTGGGCAAAAGGGGTAAAAGGCAAAAATATTAAAGTTGCTGTATTAGAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    101 TGTGGGCAAAAGGGGTAAAAGGCAAAAATATTAAAGTTGCTGTATTAGAC    150

BSNT_02220___    151 ACGGGCTGCGACACAAGCCACCCTGATTTAAAAAATCAAATCATCGGCGG    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    151 ACAGGCTGCGACACAAGCCACCCTGATTTAAAAAATCAAATCATCGGCGG    200

BSNT_02220___    201 AAAGAACTTCACGGATGACGACGGCGGCAAGGAAGATGCGATTTCCGACT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    201 AAAGAACTTCACGGATGACGACGGCGGCAAGGAAGATGCGATTTCCGACT    250

BSNT_02220___    251 ACAACGGACACGGCACACACGTCGCCGGAACGATTGCAGCTAATGATTCA    300
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU13190___is    251 ACAACGGACACGGCACACACGTCGCCGGAACAATTGCAGCTAATGATTCA    300

BSNT_02220___    301 AACGGAGGCATTGCCGGAGTCGCGCCTGAGGCAAGCCTATTGATTGTGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    301 AACGGAGGCATTGCCGGAGTCGCGCCTGAGGCAAGCCTATTGATTGTGAA    350

BSNT_02220___    351 GGTTCTTGGCGGCGAGAATGGCAGCGGACAATACGAATGGATAATTAACG    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU13190___is    351 GGTTCTTGGCGGCGAGAACGGCAGCGGACAATACGAATGGATAATTAACG    400

BSNT_02220___    401 GCATCAACTACGCGGTGGAACAGAAAGTCGACATCATCTCAATGTCCCTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    401 GCATCAACTACGCGGTGGAACAGAAAGTCGACATCATCTCAATGTCCCTT    450

BSNT_02220___    451 GGAGGGCCAAGCGATGTGCCAGAGCTGGAAGAAGCAGTGAAAAACGCAGT    500
                     ||||||||||||||||||||||||||..||||||||||||||||||||||
BSU13190___is    451 GGAGGGCCAAGCGATGTGCCAGAGCTAAAAGAAGCAGTGAAAAACGCAGT    500

BSNT_02220___    501 CAAAAACGGAGTGCTTGTCGTTTGTGCAGCGGGAAATGAAGGTGACGGCG    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    501 GAAAAACGGAGTGCTTGTCGTTTGTGCAGCGGGAAATGAAGGTGACGGCG    550

BSNT_02220___    551 ACGAACGCACAGAAGAGCTTTCCTACCCCGCAGCTTATAATGAAGTGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    551 ACGAACGCACAGAAGAGCTTTCCTACCCCGCAGCTTATAATGAAGTGATT    600

BSNT_02220___    601 GCAGTTGGATCTGTTTCTGTAGCGCGAGAATTATCAGAATTTTCTAACGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    601 GCAGTTGGATCTGTTTCTGTAGCGCGAGAATTATCAGAATTTTCTAACGC    650

BSNT_02220___    651 GAATAAAGAGATTGACCTTGTGGCACCAGGAGAAAACATCTTATCCACCC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    651 GAATAAAGAGATTGACCTTGTGGCACCAGGAGAAAACATCTTATCCACCC    700

BSNT_02220___    701 TTCCCAACAAGAAGTACGGTAAGCTGACCGGCACTTCAATGGCTGCCCCT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    701 TTCCCAACAAGAAGTACGGTAAGCTGACCGGCACTTCAATGGCTGCCCCT    750

BSNT_02220___    751 CATGTCAGCGGTGCGCTTGCTTTAATCAAAAGCTATGAAGAAGAATCATT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    751 CATGTCAGCGGTGCGCTTGCTTTAATCAAAAGCTATGAAGAAGAATCATT    800

BSNT_02220___    801 TCAAAGAAAGCTTTCTGAATCTGAGGTTTTCGCACAGCTAATCCGCAGGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    801 TCAAAGAAAGCTTTCTGAATCTGAGGTTTTCGCACAGCTAATCCGCAGGA    850

BSNT_02220___    851 CACTTCCTCTTGATATTGCAAAAACGCTGGCAGGCAATGGATTCCTGTAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    851 CACTTCCTCTTGATATTGCAAAAACGCTGGCAGGCAATGGATTCCTGTAT    900

BSNT_02220___    901 TTAACAGCTCCTGATGAGCTCGCAGAAAAAGCAGAGCAATCACATTTGTT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13190___is    901 TTAACAGCTCCTGATGAGCTCGCAGAAAAAGCAGAGCAATCACATTTGTT    950

BSNT_02220___    951 GACCCTATAA    960
                     ||||||||||
BSU13190___is    951 GACCCTATAA    960


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.