Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02213 and BSU13169

See Amino acid alignment / Visit BSNT_02213 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:46
# Commandline: needle
#    -asequence dna-align/BSNT_02213.1.22522.seq
#    -bsequence dna-align/BSU13169___ykzN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02213-BSU13169___ykzN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02213-BSU13169___ykzN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02213
# 2: BSU13169___ykzN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 172
# Identity:     160/172 (93.0%)
# Similarity:   160/172 (93.0%)
# Gaps:          11/172 ( 6.4%)
# Score: 786.0
# 
#
#=======================================

BSNT_02213         1 ----------GTGTCGGAGCATGCGGGGCGGGCACAGATTTATGATAAAA     40
                               |||||||| |||||||||||||||||||||||||||||||
BSU13169___yk      1 ATGTTTTTTGGTGTCGGA-CATGCGGGGCGGGCACAGATTTATGATAAAA     49

BSNT_02213        41 CGTCAGAGAAGCGTTTGAAGCATGCCTTTAAACCAAAAGTTACAGATGAA     90
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU13169___yk     50 CTTCAGAGAAGCGTTTGAAGCATGCCTTTAAACCAAAAGTTACAGATGAA     99

BSNT_02213        91 GCGGGTGGCTGGCACGGTGTCTGCCGTGCTGAATTGCGCGTATATGCTGT    140
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13169___yk    100 GCGGGTGGCTGGCACGGTGTCTGCCGTGCTGAATTGCGCGTATATGCTGT    149

BSNT_02213       141 TTTGTATTTGCACAGGGCATAG    162
                     ||||||||||||||||||||||
BSU13169___yk    150 TTTGTATTTGCACAGGGCATAG    171


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