Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02201 and BSU13090

See Amino acid alignment / Visit BSNT_02201 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:45
# Commandline: needle
#    -asequence dna-align/BSNT_02201___ykkC.1.22522.seq
#    -bsequence dna-align/BSU13090___ykkC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02201___ykkC-BSU13090___ykkC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02201___ykkC-BSU13090___ykkC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02201___ykkC
# 2: BSU13090___ykkC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     334/339 (98.5%)
# Similarity:   334/339 (98.5%)
# Gaps:           0/339 ( 0.0%)
# Score: 1650.0
# 
#
#=======================================

BSNT_02201___      1 ATGAAATGGGGATTGGTCGTGCTTGCCGCTGTTTTCGAGGTTGTTTGGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13090___yk      1 ATGAAATGGGGATTGGTCGTGCTTGCCGCTGTTTTCGAGGTTGTTTGGGT     50

BSNT_02201___     51 GATAGGCTTAAAGCACGCTGACTCAGCCTTAACATGGAGCGGCACTGCCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13090___yk     51 GATAGGCTTAAAGCACGCTGACTCAGCCTTAACATGGAGCGGCACTGCCA    100

BSNT_02201___    101 TCGGCATCATATTCAGTTTTTATCTTCTAATAAAGGCGACTCACAGTCTG    150
                     ||||||||||||||||.|||||.||||||||.||||||||||||||||||
BSU13090___yk    101 TCGGCATCATATTCAGCTTTTACCTTCTAATGAAGGCGACTCACAGTCTG    150

BSNT_02201___    151 CCTGTTGGTACCGTGTATGCCGTCTTTAGCGGGCTCGGCACAGCGGGAAC    200
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU13090___yk    151 CCTGTTGGTACCGTGTATGCCGTCTTTACCGGGCTCGGCACAGCGGGAAC    200

BSNT_02201___    201 AGTACTTAGTGAAATCGTTCTGTTTCATGAACCGGTTGGATGGCCGAAGC    250
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13090___yk    201 AGTACTTAGTGAAATCGTTCTTTTTCATGAACCGGTTGGATGGCCGAAGC    250

BSNT_02201___    251 TATTGTTAATTGGCGTGCTCTTAATCGGTGTAATCGGGTTGAAGCTTGTG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13090___yk    251 TATTGTTAATTGGCGTGCTCTTAATCGGTGTAATCGGGTTGAAGCTTGTG    300

BSNT_02201___    301 ACACAGGATGAGACAGAGGAAAAAGGAGGCGAGGCATAA    339
                     |||||||||||||||||||||||||||||||||||||||
BSU13090___yk    301 ACACAGGATGAGACAGAGGAAAAAGGAGGCGAGGCATAA    339


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