Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02199 and BSU13070

See Amino acid alignment / Visit BSNT_02199 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:45
# Commandline: needle
#    -asequence dna-align/BSNT_02199___ykkA.1.22522.seq
#    -bsequence dna-align/BSU13070___ykkA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02199___ykkA-BSU13070___ykkA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02199___ykkA-BSU13070___ykkA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02199___ykkA
# 2: BSU13070___ykkA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 528
# Identity:     520/528 (98.5%)
# Similarity:   520/528 (98.5%)
# Gaps:           0/528 ( 0.0%)
# Score: 2568.0
# 
#
#=======================================

BSNT_02199___      1 ATGAAGGACTTATCCATAAGAAACGACATGGCGCCAACGGTCAGTCTGCT     50
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU13070___yk      1 ATGAAGGACTTATCCATAAGAAACGACATGGCGCCAACGGTCAGTTTGCT     50

BSNT_02199___     51 GTATTCCGCAGTGGAAGAAAACAGTCTCCGTCTGGCTTCTATCGTAAGCC    100
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU13070___yk     51 GTATTCCGCAGTGGAAGAAAACAGTCTCCGTCTGGCTTCCATCGTAAGCC    100

BSNT_02199___    101 ATATGACACACAGTGAACTTTACTATAAGGGGCGCTGCCAAACAAAAAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13070___yk    101 ATATGACACACAGTGAACTTTACTATAAGGGGCGCTGCCAAACAAAAAAC    150

BSNT_02199___    151 AGCACGGCTCAGCTTTTGCACCATATCACAAATGTTGATATCAGATGGGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13070___yk    151 AGCACGGCTCAGCTTTTGCACCATATCACAAATGTTGATATCAGATGGGT    200

BSNT_02199___    201 CTGGCGTATCAAGGAAAATCGGATACCGAACCATATTGAACAGACATACG    250
                     ||||||||||||||||||||||||.|||.||||||||||||||.||||||
BSU13070___yk    201 CTGGCGTATCAAGGAAAATCGGATCCCGGACCATATTGAACAGGCATACG    250

BSNT_02199___    251 GCCCGATGACAGATGAAAGCGGACGGCTGCCTGTACCGGTGAATCAGCCA    300
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU13070___yk    251 GCCCGATGACAGATGAAAGCGGACGGCTGCCTGAACCGGTGAATCAGCCA    300

BSNT_02199___    301 GACTTAGATGAACTCCTGAAAAGACATCAGCATGTAGTAGAGGAGCTGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU13070___yk    301 GACTTAGATGAACTCCTGAAAAGACATCAGCATGTAGTAGAGAAGCTGAA    350

BSNT_02199___    351 ATCGGTATGCTTCACTTTAACAGAAAATGCTTTGAACCAGCCGCTTTCCT    400
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU13070___yk    351 ATCGGTATGCTTCACTTTAACTGAAAATGCTTTGAACCAGCCGCTTTCCT    400

BSNT_02199___    401 TCGAAGGTGACACCGCGACGATACGATGGGGAATTTGGCATATGGCAGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13070___yk    401 TCGAAGGTGACACCGCGACGATACGATGGGGAATTTGGCATATGGCAGAT    450

BSNT_02199___    451 CATAACCGCTATCATCAGGCACATATTGAAGCTCTCAAAAAAGAATGGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13070___yk    451 CATAACCGCTATCATCAGGCACATATTGAAGCTCTCAAAAAAGAATGGAA    500

BSNT_02199___    501 GCAGGATGTGGCGAAGTATGAACGCTAA    528
                     ||||||||||||||||||||||||||||
BSU13070___yk    501 GCAGGATGTGGCGAAGTATGAACGCTAA    528


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