Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02198 and BSU13060
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:45
# Commandline: needle
# -asequence dna-align/BSNT_02198___ykjA.1.22522.seq
# -bsequence dna-align/BSU13060___ykjA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02198___ykjA-BSU13060___ykjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02198___ykjA-BSU13060___ykjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02198___ykjA
# 2: BSU13060___ykjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 733
# Identity: 719/733 (98.1%)
# Similarity: 719/733 (98.1%)
# Gaps: 2/733 ( 0.3%)
# Score: 3527.0
#
#
#=======================================
BSNT_02198___ 1 GTGTTATGGATGATATGGGTATTTTTACTGAAGCCAGTTATCGTATTTTC 50
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU13060___yk 1 GTGTTATGGATGGTATGGGTATTTTTACTGAAGCCAGTTATCGTATTTTC 50
BSNT_02198___ 51 GATTGCGTATATTTTATTTCGGCTTGCCGGTAAAAAAGCTGTGTCACAAA 100
||||||.||||||||.||||||||||||||||||||||||||||||||||
BSU13060___yk 51 GATTGCATATATTTTGTTTCGGCTTGCCGGTAAAAAAGCTGTGTCACAAA 100
BSNT_02198___ 101 TGAACAATTTTGATCTGCTTTTGACCTTCGCAATCGGAACCATTATCAGT 150
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU13060___yk 101 TGAACAATTTTGACCTGCTTTTGACCTTCGCAATCGGAACCATTATCAGT 150
BSNT_02198___ 151 GAGCCGATCCTTACATCCAAGCTGCCGATGTCAATTTATTATGCGGGTGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 151 GAGCCGATCCTTACATCCAAGCTGCCGATGTCAATTTATTATGCGGGTGC 200
BSNT_02198___ 201 TTTTTTGGTGCTTTATCTTATCATGAGCAAGCTCTCTTTATCTAATAAAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 201 TTTTTTGGTGCTTTATCTTATCATGAGCAAGCTCTCTTTATCTAATAAAT 250
BSNT_02198___ 251 GGCGATGGCTCCTAGTCGTGAGCCCGACTGTCCTAATCCGAAACGGGGAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 251 GGCGATGGCTCCTAGTCGTGAGCCCGACTGTCCTAATCCGAAACGGGGAT 300
BSNT_02198___ 301 ATTGATGAACGCGGCCTTCGTAAAGAAAGGCTGACTGTTAATGAGCTGCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 301 ATTGATGAACGCGGCCTTCGTAAAGAAAGGCTGACTGTTAATGAGCTGCT 350
BSNT_02198___ 351 TGGAAAGCTGAGGGAAAAGGGCTATGCCGACCCGGCTGACATTGATCTTG 400
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 351 CGGAAAGCTGAGGGAAAAGGGCTATGCCGACCCGGCTGACATTGATCTTG 400
BSNT_02198___ 401 CTATCATTGAAGAAACGGGAGAAGTAAGCGTCATCCCGAGAGAGGAAGCG 450
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU13060___yk 401 CTATCATTGAAGAAACGGGAGAAGTAAGCGTCATCCCGAAAGAGGAAGCG 450
BSNT_02198___ 451 AGAGCGGTGCAGGTGCGGGATTTGAATATGGAAGCTGAACGGAATTTTAT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 451 AGAGCGGTGCAGGTGCGGGATTTGAATATGGAAGCTGAACGGAATTTTAT 500
BSNT_02198___ 501 CCCGATTCCGCTCATACTGGATGGCGAAATCCTTGATCATAATTTGAAAT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 501 CCCGATTCCGCTCATACTGGATGGCGAAATCCTTGATCATAATTTGAAAT 550
BSNT_02198___ 551 ATCTCCAAAAAAACCGATCCTGGCTGTTTGAGAAGCTTGAGGAAAAAGGG 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13060___yk 551 ATCTCCAAAAAAACCGATCCTGGCTGTTTGAGAAGCTTGAGGAAAAAGGG 600
BSNT_02198___ 601 TACAGCCCCAAACTGCTGTCTTCGATCA-CCTTAGGCACGATGAATGCGC 649
||||||||||||||||||||||||||.| |||| ||||||||||||||.|
BSU13060___yk 601 TACAGCCCCAAACTGCTGTCTTCGATTATCCTT-GGCACGATGAATGCAC 649
BSNT_02198___ 650 GAGGTGATATATCCCTTGATTTAAATACCTCTAATGACCCGCAGCATGAT 699
|.|||||||||||||||||||||||||||.|||||||.||||||||||||
BSU13060___yk 650 GCGGTGATATATCCCTTGATTTAAATACCGCTAATGAACCGCAGCATGAT 699
BSNT_02198___ 700 CCTTACTTATATAAACCGGGAAATAACAACTAA 732
|||||||||||||||||||||||||||||.|||
BSU13060___yk 700 CCTTACTTATATAAACCGGGAAATAACAATTAA 732
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