Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02195 and BSU13030

See Amino acid alignment / Visit BSNT_02195 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:44
# Commandline: needle
#    -asequence dna-align/BSNT_02195___ykhA.1.22522.seq
#    -bsequence dna-align/BSU13030___ykhA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02195___ykhA-BSU13030___ykhA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02195___ykhA-BSU13030___ykhA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02195___ykhA
# 2: BSU13030___ykhA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     505/519 (97.3%)
# Similarity:   505/519 (97.3%)
# Gaps:           0/519 ( 0.0%)
# Score: 2469.0
# 
#
#=======================================

BSNT_02195___      1 ATGGAAACACCGGAAACAAGATTTTGTAAAGAGTCAAAGGTTGTGAAAAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13030___yk      1 ATGGAAACACCGGAAACAAGATTTTGTAAAGAGTCAAAGGTTGTGAAAAC     50

BSNT_02195___     51 CAGCAGGGTGTTCCCGCTTGACACGAACAACCATAATACGCTGTTTGGCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13030___yk     51 CAGCAGGGTGTTCCCGCTTGACACGAACAACCATAATACGCTGTTTGGCG    100

BSNT_02195___    101 GAAAATTAATGAGCTACATCGATGACATTGCCTCTATTTCCGCGGCGCGC    150
                     |||||||||||||||||||.||.|||||||||||||||||.|||||||||
BSU13030___yk    101 GAAAATTAATGAGCTACATAGACGACATTGCCTCTATTTCAGCGGCGCGC    150

BSNT_02195___    151 CATTGCAGACGTGAAACCGTAACGGCTTCAATGGATTCTGTAGATTTTTT    200
                     |||||||||||||||||.|||||.||||||||||||||||||||||||||
BSU13030___yk    151 CATTGCAGACGTGAAACGGTAACAGCTTCAATGGATTCTGTAGATTTTTT    200

BSNT_02195___    201 AAAGCCGATCGGGCAAAAGGATTCTGTCTGCCTAGAGTCCTATGTGACAT    250
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU13030___yk    201 AAAGCCGATCGGGCAAAAGGATTCTGTCTGCCTAGAGTCATATGTGACAT    250

BSNT_02195___    251 GGGTCGGCACATCTTCTATGGAAGTATTTGTGAAAGTCATTAAGGAGCAT    300
                     ||||||||||||||||.||||||||||||||||||||.||||||||||||
BSU13030___yk    251 GGGTCGGCACATCTTCCATGGAAGTATTTGTGAAAGTTATTAAGGAGCAT    300

BSNT_02195___    301 TTGATGACTGGCGAACGGGAACTCGCTGCCACATCCTTTTTGACATTTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13030___yk    301 TTGATGACTGGCGAACGGGAACTCGCTGCCACATCCTTTTTGACATTTGT    350

BSNT_02195___    351 CGCATTAGATTCAAATGGCAAGCCGGTGCCTGTACCGAGGGTTGTACCGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU13030___yk    351 CGCATTAGATTCAAATGGCAAGCCGGTGCCTGTACCGAGGGTTGTACCGG    400

BSNT_02195___    401 AAACAGAAGAAGAAATCATGCTTCATAATACAGCAGTACAGCGCGCTAAT    450
                     ||||||||||||||||||||||.|||||||||||.||||||||.||||||
BSU13030___yk    401 AAACAGAAGAAGAAATCATGCTGCATAATACAGCTGTACAGCGTGCTAAT    450

BSNT_02195___    451 GAACGAAAGAACCGCAAGAAGCACAGCCAGGCGCTTGCAAATGCGCTCGG    500
                     |||||.|||||||||||||..|||||||||||||||||||||||||||||
BSU13030___yk    451 GAACGTAAGAACCGCAAGAGACACAGCCAGGCGCTTGCAAATGCGCTCGG    500

BSNT_02195___    501 AACTGATAAGCCTTGGTGA    519
                     |||||||||||||||||||
BSU13030___yk    501 AACTGATAAGCCTTGGTGA    519


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