Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02188 and BSU12980
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:43
# Commandline: needle
# -asequence dna-align/BSNT_02188___ykfB.1.22522.seq
# -bsequence dna-align/BSU12980___ykfB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02188___ykfB-BSU12980___ykfB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02188___ykfB-BSU12980___ykfB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02188___ykfB
# 2: BSU12980___ykfB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 1062/1101 (96.5%)
# Similarity: 1062/1101 (96.5%)
# Gaps: 21/1101 ( 1.9%)
# Score: 5228.0
#
#
#=======================================
BSNT_02188___ 1 ATGAAAATCATTCGAATCGAAACAAGCCGAATCGCAATTCCGCTGACAAA 50
|||||||||||||||||||||||||||||||||||..|.|||||||||||
BSU12980___yk 1 ATGAAAATCATTCGAATCGAAACAAGCCGAATCGCTGTCCCGCTGACAAA 50
BSNT_02188___ 51 GCCGTTTAAAACCGCGCTTCGCACTGTGTATACGGCTGAATCAGTCATAG 100
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12980___yk 51 GCCGTTTAAAACCGCACTTCGCACTGTGTATACGGCTGAATCAGTCATAG 100
BSNT_02188___ 101 TAAGGATTACTTATGACAGCGGTGCAGTCGGATGGGGAGAAGCACCCCCG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 101 TAAGGATTACTTATGACAGCGGTGCAGTCGGATGGGGAGAAGCACCCCCG 150
BSNT_02188___ 151 ACGTTAGTGATTACAGGAGACAGCATGGATAGCATTGAAAGTGCCATTCA 200
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU12980___yk 151 ACGTTAGTGATTACAGGAGACAGCATGGATAGCATTGAAAGTGCCATCCA 200
BSNT_02188___ 201 CAATGTTTTAAAACCGGCATTGCTTGGAAAAAGCCTGGCGGGCTATGAGG 250
|.||||.||.||.|||||||||||||||||||||||||||||||||||||
BSU12980___yk 201 CCATGTGTTGAAGCCGGCATTGCTTGGAAAAAGCCTGGCGGGCTATGAGG 250
BSNT_02188___ 251 CCATTCTGCACGACATCCAGCATCTTCTTACAGGAAATATGAGCGCGAAG 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 251 CCATTCTGCACGACATCCAGCATCTTCTTACAGGAAATATGAGCGCGAAG 300
BSNT_02188___ 301 GCTGCTGTAGAAATGGCTCTATACGACGGCTGGGCGCAGATGTGCGGGCT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 301 GCTGCTGTAGAAATGGCTCTATACGACGGCTGGGCGCAGATGTGCGGGCT 350
BSNT_02188___ 351 GCCGCTTTATCAAATGCTTGGCGGATATCGAGATACACTGGAAACAGATT 400
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU12980___yk 351 GCCGCTTTATCAAATGCTTGGCGGATATCGAGATACGCTGGAAACAGATT 400
BSNT_02188___ 401 ATACCGTCAGTGTCAACTCACCTGAAGAGATGGCAGCTGATGCCGAGAAT 450
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 401 ATACTGTCAGTGTCAACTCACCTGAAGAGATGGCAGCTGATGCCGAGAAT 450
BSNT_02188___ 451 TATCTCAAACAAGGCTTTCAAACGCTGAAAATAAAGGTCGGAAAAGATGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 451 TATCTCAAACAAGGCTTTCAAACGCTGAAAATAAAGGTCGGAAAAGATGA 500
BSNT_02188___ 501 TATTGCAACAGATATCGCCCGTATCCAGGAAATCAGAAAACGTGTCGGAT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 501 TATTGCAACAGATATCGCCCGTATCCAGGAAATCAGAAAACGTGTCGGAT 550
BSNT_02188___ 551 CAGCTGTGAAACTGCGTTTAGACGCTAATCAGGGGTGGAGGCCGAAGGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 551 CAGCTGTGAAACTGCGTTTAGACGCTAATCAGGGGTGGAGGCCGAAGGAA 600
BSNT_02188___ 601 GCGGTAACTGCCATTCGGAAAATGGAGGATGCGGGTCTAGGCATTGAGCT 650
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU12980___yk 601 GCGGTAACTGCCATTCGGAAAATGGAGGATGCGGGCCTAGGCATTGAGCT 650
BSNT_02188___ 651 TGTCGAGCAGCCTGTCCATAAAGACGATCTCGCTGGGCTTAAAAAGGTGA 700
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12980___yk 651 TGTCGAGCAGCCTGTCCATAAAGATGATCTCGCTGGGCTTAAAAAGGTGA 700
BSNT_02188___ 701 CAGATGCAACAGATACGCCGATTATGGCTGATGAAAGTGTTTTTACACCG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 701 CAGATGCAACAGATACGCCGATTATGGCTGATGAAAGTGTTTTTACACCG 750
BSNT_02188___ 751 CGCCAGGCGTTCGAAGTTCTGCAAACCCGGAGCGCAGACTTGATCAATAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 751 CGCCAGGCGTTCGAAGTTCTGCAAACCCGGAGCGCAGACTTGATCAATAT 800
BSNT_02188___ 801 TAAATTGATGAAAGCGGGCGGCATCAGCGGAGCAGAGAAAATTAATGCTA 850
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU12980___yk 801 TAAATTGATGAAAGCGGGCGGCATCAGCGGAGCAGAGAAAATTAATGCCA 850
BSNT_02188___ 851 TGGCGGAGGCCTGCGGGGTGGAGTGTATGGTCGGCAGCATGATCGAAACG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 851 TGGCGGAGGCCTGCGGGGTGGAGTGTATGGTCGGCAGCATGATCGAAACG 900
BSNT_02188___ 901 AAGCTGGGCATTACGGCCGCGGCGCATTTTGCGGCAAGCAAGAGAAACAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 901 AAGCTGGGCATTACGGCCGCGGCGCATTTTGCGGCAAGCAAGAGAAACAT 950
BSNT_02188___ 951 CACACGCTTTGATTTTGACGCGCCGCTGATGCTGAAAACAGATGTATTCA 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12980___yk 951 CACACGCTTTGATTTTGACGCGCCGCTGATGCTGAAAACAGATGTATTCA 1000
BSNT_02188___ 1001 AAGGCGGCATAACATATAGCGGCAGTACGATTTCGATGCCTGGCAAACCG 1050
|.|||||||||||||||||||||||.||||||||||||||||||||||||
BSU12980___yk 1001 ATGGCGGCATAACATATAGCGGCAGCACGATTTCGATGCCTGGCAAACCG 1050
BSNT_02188___ 1051 GGCCTCGGAATCACCGGGACTGCGC-TTTGA------------------- 1080
|||||||||||||.||||.|||||| |||||
BSU12980___yk 1051 GGCCTCGGAATCATCGGGGCTGCGCTTTTGAAAGGGGAAAAAGAGCAATG 1100
BSNT_02188___ 1080 - 1080
BSU12980___yk 1101 A 1101
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