Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02179 and BSU12900
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:42
# Commandline: needle
# -asequence dna-align/BSNT_02179___htrA.1.22522.seq
# -bsequence dna-align/BSU12900___htrA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02179___htrA-BSU12900___htrA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02179___htrA-BSU12900___htrA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02179___htrA
# 2: BSU12900___htrA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 1338/1353 (98.9%)
# Similarity: 1338/1353 (98.9%)
# Gaps: 3/1353 ( 0.2%)
# Score: 6642.0
#
#
#=======================================
BSNT_02179___ 1 ATGATGGATAACTATCGTGATGAAAACAGAACGAAAGGTAATGAGAATGA 50
|||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 1 ---ATGGATAACTATCGTGATGAAAACAGAACGAAAGGTAATGAGAATGA 47
BSNT_02179___ 51 GGTCTTTTTAACGAAAGAGAACGATCAGAGCGCCTCCTACTCGGCCCGCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 48 GGTCTTTTTAACGAAAGAGAACGATCAGAGCGCCTCCTACTCGGCCCGCA 97
BSNT_02179___ 101 ATGTCATTCATGATCAGGAGAAGAAAAAACGAGGATTCGGATGGTTCAGA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 98 ATGTCATTCATGATCAGGAGAAGAAAAAACGAGGATTCGGATGGTTCAGA 147
BSNT_02179___ 151 CCGTTGCTTGGCGGAGTGATCGGCGGCAGTCTCGCCCTTGGCATTTACAC 200
||||||||||||||||||||||||||||||||.||.||||||||||||||
BSU12900___ht 148 CCGTTGCTTGGCGGAGTGATCGGCGGCAGTCTTGCTCTTGGCATTTACAC 197
BSNT_02179___ 201 GTTTACACCGCTTGGCGACCATGATTCTCAGGACACTGCAAAACAATCAT 250
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12900___ht 198 GTTTACACCGCTTGGTGACCATGATTCTCAGGACACTGCAAAACAATCAT 247
BSNT_02179___ 251 CCAGCCAGCAGCAAACGCAATCTGTTACAGCAACAAGCACCTCCTCTGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 248 CCAGCCAGCAGCAAACGCAATCTGTTACAGCAACAAGCACCTCCTCTGAA 297
BSNT_02179___ 301 TCTAAAAAAAGCTCAAGCAGCTCATCTGCATTCAAGAGCGAGGACTCTTC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 298 TCTAAAAAAAGCTCAAGCAGCTCATCTGCATTCAAGAGCGAGGACTCTTC 347
BSNT_02179___ 351 TAAAATCTCAGATATGGTAGAAGACCTTTCACCAGCGATTGTCGGTATTA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 348 TAAAATCTCAGATATGGTAGAAGACCTTTCACCAGCGATTGTCGGTATTA 397
BSNT_02179___ 401 CAAATCTTCAGGCACAATCAAACAGCTCTTTGTTCGGCTCTAGTTCTTCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 398 CAAATCTTCAGGCACAATCAAACAGCTCTTTGTTCGGCTCTAGTTCTTCT 447
BSNT_02179___ 451 GATTCCAGCGAAGATACAGAAAGCGGTTCAGGGTCAGGTGTCATTTTCAA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 448 GATTCCAGCGAAGATACAGAAAGCGGTTCAGGGTCAGGTGTCATTTTCAA 497
BSNT_02179___ 501 AAAAGAGAATGGCAAGGCTTATATCATTACAAATAACCACGTCGTAGAAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 498 AAAAGAGAATGGCAAGGCTTATATCATTACAAATAACCACGTCGTAGAAG 547
BSNT_02179___ 551 GGGCATCATCACTGAAGGTATCTTTATATGACGGCACTGAGGTTACTGCA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 548 GGGCATCATCACTGAAGGTATCTTTATATGACGGCACTGAGGTTACTGCA 597
BSNT_02179___ 601 AAGCTGGTAGGCAGTGACTCGTTAACTGATTTAGCCGTCCTCCAAATCAG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 598 AAGCTGGTAGGCAGTGACTCGTTAACTGATTTAGCCGTCCTCCAAATCAG 647
BSNT_02179___ 651 TGATGACCACGTCACAAAAGTGGCAAACTTCGGTGATTCATCTGATCTTA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 648 TGATGACCACGTCACAAAAGTGGCAAACTTCGGTGATTCATCTGATCTTA 697
BSNT_02179___ 701 GAACAGGCGAGACCGTTATTGCGATTGGGGATCCGCTTGGAAAAGACCTG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 698 GAACAGGCGAGACCGTTATTGCGATTGGGGATCCGCTTGGAAAAGACCTG 747
BSNT_02179___ 751 TCCCGCACAGTAACACAAGGAATTGTAAGCGGCGTGGACAGAACGGTTTC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 748 TCCCGCACAGTAACACAAGGAATTGTAAGCGGCGTGGACAGAACGGTTTC 797
BSNT_02179___ 801 AATGTCTACATCAGCCGGCGAAACGAGCATTAACGTCATTCAGACAGACG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 798 AATGTCTACATCAGCCGGCGAAACGAGCATTAACGTCATTCAGACAGACG 847
BSNT_02179___ 851 CAGCAATTAATCCAGGTAACAGCGGCGGTCCTTTGTTAAATACAGACGGC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 848 CAGCAATTAATCCAGGTAACAGCGGCGGTCCTTTGTTAAATACAGACGGC 897
BSNT_02179___ 901 AAAATTGTCGGCATTAACAGTATGAAAATCAGTGAGGATGATGTTGAGGG 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 898 AAAATTGTCGGCATTAACAGTATGAAAATCAGTGAGGATGATGTTGAGGG 947
BSNT_02179___ 951 CATCGGATTTGCCATTCCAAGCAATGACGTAAAACCGATTGCTGAAGAAC 1000
.||||||||.|||||||||||||||||||||||||||||||||||||||.
BSU12900___ht 948 TATCGGATTCGCCATTCCAAGCAATGACGTAAAACCGATTGCTGAAGAAT 997
BSNT_02179___ 1001 TGCTGTCTAAAGGCCAAATTGAACGTCCATATATCGGTGTCAGCATGCTT 1050
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU12900___ht 998 TGCTGTCTAAAGGACAAATTGAACGTCCATATATCGGTGTCAGCATGCTT 1047
BSNT_02179___ 1051 GATCTGGAACAAGTGCCGCAAAATTACCAAGAAGGCACACTCGGCCTGTT 1100
|||||.||.|||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 1048 GATCTAGAGCAAGTGCCGCAAAATTACCAAGAAGGCACACTCGGCCTGTT 1097
BSNT_02179___ 1101 CGGCAGCCAGCTGAATAAAGGTGTTTACATCCGTGAGGTCGCTTCAGGCT 1150
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU12900___ht 1098 CGGCAGCCAGCTGAATAAAGGCGTTTACATCCGTGAGGTCGCTTCAGGCT 1147
BSNT_02179___ 1151 CTCCTGCTGAAAAGGCCGGATTAAAAGCGGAGGATATTATCATCGGCCTA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 1148 CTCCTGCTGAAAAGGCCGGATTAAAAGCGGAGGATATTATCATCGGCCTA 1197
BSNT_02179___ 1201 AAAGGTAAAGAAATTGATACAGGCAGTGAATTGCGCAATATCTTATATAA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12900___ht 1198 AAAGGTAAAGAAATTGATACAGGCAGTGAATTGCGCAATATCTTATATAA 1247
BSNT_02179___ 1251 AGACGCAAAGATCGGTGAAACCGTTGAAGTGAAAATTCTCCGAAACGGCA 1300
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12900___ht 1248 AGACGCAAAGATCGGTGATACCGTTGAAGTGAAAATTCTCCGAAACGGCA 1297
BSNT_02179___ 1301 AAGAAATGACGAAAAAAATTAAACTTGATCAAAAAGAAGAGAAAACTTCG 1350
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU12900___ht 1298 AAGAAATGACGAAAAAAATTAAACTGGATCAAAAAGAAGAGAAAACTTCG 1347
BSNT_02179___ 1351 TAA 1353
|||
BSU12900___ht 1348 TAA 1350
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