Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02177 and BSU12880
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:41
# Commandline: needle
# -asequence dna-align/BSNT_02177___ykcB.1.22522.seq
# -bsequence dna-align/BSU12880___ykcB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02177___ykcB-BSU12880___ykcB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02177___ykcB-BSU12880___ykcB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02177___ykcB
# 2: BSU12880___ykcB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2151
# Identity: 2085/2151 (96.9%)
# Similarity: 2085/2151 (96.9%)
# Gaps: 0/2151 ( 0.0%)
# Score: 10161.0
#
#
#=======================================
BSNT_02177___ 1 GTGGAAAAGAAAAAACGCGAGCTGGATATTTTCCTCATCCTCATTTTGCT 50
|||||||||||||||||||||||||||||..|||||.|||||||||||||
BSU12880___yk 1 GTGGAAAAGAAAAAACGCGAGCTGGATATCGTCCTCCTCCTCATTTTGCT 50
BSNT_02177___ 51 CGCATCTGCATTCTTAAATATCTATAACATCTGGAATGATGATACGGTGA 100
||||||||||||||||||||||||||||||.|||||.||.||.|||||||
BSU12880___yk 51 CGCATCTGCATTCTTAAATATCTATAACATTTGGAAGGACGACACGGTGA 100
BSNT_02177___ 101 ATCCTTATTACACCGCTGCAGTCACAAGTATGATGCAAAGCTTTCATAAT 150
||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU12880___yk 101 ATCCTTATTACACCGCGGCAGTTACAAGTATGATGCAAAGCTTTCATAAT 150
BSNT_02177___ 151 TTTTTCTATGCCTCATTCGACGCGGCGGGGTTTATAACGGTTGATAAACC 200
||.||.|||||.||.|||||.||.||.||.||||||||.||.||||||||
BSU12880___yk 151 TTCTTTTATGCTTCGTTCGATGCTGCCGGCTTTATAACAGTAGATAAACC 200
BSNT_02177___ 201 GCCTATTACGTTTCAGATACAAACCATCAGCGCACTTATATTCGGTATGC 250
||||.||||.|..||.||.|||||.|||||||||||.|||||||||||||
BSU12880___yk 201 GCCTGTTACATACCAAATCCAAACGATCAGCGCACTGATATTCGGTATGC 250
BSNT_02177___ 251 ACGGCTGGAGCGTCATCCTGCCTCAGGCACTTGCTGGTGTAGGTTCTGTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 251 ACGGCTGGAGCGTCATCCTGCCTCAGGCACTTGCTGGTGTAGGTTCTGTC 300
BSNT_02177___ 301 CTTTTAATGTATCTGTTAATAAAACCGACATTCGGTAAGACAGCAGCAAG 350
|||.|.|||||..||.|.|||||.||||||||.||.||.||.||.||..|
BSU12880___yk 301 CTTCTTATGTACTTGCTGATAAAGCCGACATTTGGAAAAACGGCGGCGCG 350
BSNT_02177___ 351 AATTGCCTCTTTCATCATGGCATGTACACCGATTGCTGTAGCTGTAGCAC 400
.||||||||.||..|.|||||||||||.|||||.||||||||||||||||
BSU12880___yk 351 TATTGCCTCATTTGTTATGGCATGTACGCCGATAGCTGTAGCTGTAGCAC 400
BSNT_02177___ 401 GTACAAACAATGTTGATGCATTACTGGTATTTTTCTTATTGCTTGCTACA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 401 GTACAAACAATGTTGATGCATTACTGGTATTTTTCTTATTGCTTGCTACA 450
BSNT_02177___ 451 TGGCTTCTCTTTAAAGCGATCAGAAAAGGAAAGCTGATCTGGCTGTTAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 451 TGGCTTCTCTTTAAAGCGATCAGAAAAGGAAAGCTGATCTGGCTGTTAGC 500
BSNT_02177___ 501 AGCATTTTTCGTTGTTGGAGTAGGATTTAATACAAAAATGCTGCAGGCTT 550
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU12880___yk 501 AGCATTTTTCGTTGTTGGAGTAGGTTTTAATACAAAAATGCTGCAGGCTT 550
BSNT_02177___ 551 ACATGATTTTACCGGCTTTCTTATTGTTCTATCTGATTGCGGCAAACGCC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 551 ACATGATTTTACCGGCTTTCTTATTGTTCTATCTGATTGCGGCAAACGCC 600
BSNT_02177___ 601 ACAATCAAGAAAAAAATCGTTTCATTGGTAAGTGCGTTAGCCGTATTAGC 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 601 ACAATCAAGAAAAAAATCGTTTCATTGGTAAGTGCGTTAGCCGTATTAGC 650
BSNT_02177___ 651 AGCCGTTTCGTTATCGTGGCCGCTCATTGTCGACAATATCCCTGCAAGCA 700
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU12880___yk 651 AGCCGTTTCGTTATCGTGGCCGCTCATTGTTGACAATATCCCTGCAAGCA 700
BSNT_02177___ 701 AGCGGCCTTATATCGGAAGCAGCCAAACCAACTCTGTTTTGGAATTGGCT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 701 AGCGGCCTTATATCGGAAGCAGCCAAACCAACTCTGTTTTGGAATTGGCT 750
BSNT_02177___ 751 TTCGGCTATAACGGAATCCAGCGGCTGACAGGCCAAAATTCAGGCGGCGG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 751 TTCGGCTATAACGGAATCCAGCGGCTGACAGGCCAAAATTCAGGCGGCGG 800
BSNT_02177___ 801 CCAGGGTGCGCCAAACAAAGACGCTTCAAAAGAAATGTCTTCTTCTGATA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 801 CCAGGGTGCGCCAAACAAAGACGCTTCAAAAGAAATGTCTTCTTCTGATA 850
BSNT_02177___ 851 ACACTCAAGCACCGCCTAATCAGTCATCAAGCAACAGCTCATCAAGCGAT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 851 ACACTCAAGCACCGCCTAATCAGTCATCAAGCAACAGCTCATCAAGCGAT 900
BSNT_02177___ 901 GGTAAATCCTCAAATGGCAATATGGCGGCGCCTCCATCCAATGGCCAAAT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 901 GGTAAATCCTCAAATGGCAATATGGCGGCGCCTCCATCCAATGGCCAAAT 950
BSNT_02177___ 951 GCCAAGCGGCGGTCAAGGAGGCCCTCCAAGCGGCGGAGATGGCGGCCAAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 951 GCCAAGCGGCGGTCAAGGAGGCCCTCCAAGCGGCGGAGATGGCGGCCAAG 1000
BSNT_02177___ 1001 GCGGACCCGGCGGAGACGGAGGGAAAGGCGGTACAGGAACCGGTTCGAAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1001 GCGGACCCGGCGGAGACGGAGGGAAAGGCGGTACAGGAACCGGTTCGAAA 1050
BSNT_02177___ 1051 ATGCAATCAGGTTCAGGGATGTTTGGAACGGGAACACCTGGTCCACTGCG 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1051 ATGCAATCAGGTTCAGGGATGTTTGGAACGGGAACACCTGGTCCACTGCG 1100
BSNT_02177___ 1101 GCTTTTCCAACAAGAGTTATCTGATCAAATCAGCTGGCTTCTGCCATTTG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1101 GCTTTTCCAACAAGAGTTATCTGATCAAATCAGCTGGCTTCTGCCATTTG 1150
BSNT_02177___ 1151 CGATTTTTGGAATCGCAGGCTTACTGATCGCTGGCGCGAGAGAAAGAAGA 1200
||||.||||||||||||||||||||||||||||||||.||||||||||||
BSU12880___yk 1151 CGATATTTGGAATCGCAGGCTTACTGATCGCTGGCGCAAGAGAAAGAAGA 1200
BSNT_02177___ 1201 AGATTATCTATAGAGCAGAAGGAAACGGTGTTCTGGGTTGCGTGGCTTGT 1250
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1201 AGATTATCTGTAGAGCAGAAGGAAACGGTGTTCTGGGTTGCGTGGCTTGT 1250
BSNT_02177___ 1251 ACCGATTGCCGGATTCTTCAGTGTCGCAGAATTTTTCCATCATTATTATC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1251 ACCGATTGCCGGATTCTTCAGTGTCGCAGAATTTTTCCATCATTATTATC 1300
BSNT_02177___ 1301 TCATCATGCTGGCACCGCCGATTGCGGCTCTTGTCGGTGCGGGATGGGTT 1350
|||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU12880___yk 1301 TCATCATGCTGGCACCGCCGATTGCGGCTCTTGTCGGTGCGGGGTGGGTC 1350
BSNT_02177___ 1351 GCTCTTGTTCATCTGTACCGCAATCAGACAGGCTGGAAAGCATGGCTTTT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1351 GCTCTTGTTCATCTGTACCGCAATCAGACAGGCTGGAAAGCATGGCTTTT 1400
BSNT_02177___ 1401 GCCGGGAGCAATTATTGCGACAACTGGATTTGAATTGTTTATTCTCAGAA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1401 GCCGGGAGCAATTATTGCGACAACTGGATTTGAATTGTTTATTCTCAGAA 1450
BSNT_02177___ 1451 ACTACAACGATCAAATCGGTGCAGGCTGGAGCATCGGTGTAGGTGTTATC 1500
|||||||||||||||||||||..||.|||||.|||||.||||||||||||
BSU12880___yk 1451 ACTACAACGATCAAATCGGTGTTGGATGGAGTATCGGGGTAGGTGTTATC 1500
BSNT_02177___ 1501 GGCGTGTTGTCAGCGATTGCTTTGCTGCTGTTTAAACAGCGCCAAAAACC 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1501 GGCGTGTTGTCAGCGATTGCTTTGCTGCTGTTTAAACAGCGCCAAAAACC 1550
BSNT_02177___ 1551 GTTCAGTTATTATGTTTCACTTGCAGCTCTCCTCGCATTGCTGGTGATGC 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1551 GTTCAGTTATTATGTTTCACTTGCAGCTCTCCTCGCATTGCTGGTGATGC 1600
BSNT_02177___ 1601 CGATTTACTGGGCAAGTACACCGCTTCTGTACGGAGGCAACAGCTCACTG 1650
||||.||.||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1601 CGATGTATTGGGCAAGTACACCGCTTCTGTACGGAGGCAACAGCTCACTG 1650
BSNT_02177___ 1651 CCTGAAACAGGCCCTCAGCTCGCATCAATGAGCGGAAAAGGCATGGGAAT 1700
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU12880___yk 1651 CCTGAAACAGGCCCTCAACTCGCATCAATGAGCGGAAAAGGCATGGGAAT 1700
BSNT_02177___ 1701 GTCTGATGCGACTGTAAATGAAAAACTGATCAAATATCTAGAGGAGAATA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1701 GTCTGATGCGACTGTAAATGAAAAACTGATCAAATATCTAGAGGAGAATA 1750
BSNT_02177___ 1751 ACTCCGGAGCTGAATACCTATTCGCCACAACCGATTCGAACACAGCGGCA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1751 ACTCCGGAGCTGAATACCTATTCGCCACAACCGATTCGAACACAGCGGCA 1800
BSNT_02177___ 1801 CCATATATCATTAAAACGAAAAAAGCTGTCATGGCTATTGGCGGATACAG 1850
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU12880___yk 1801 CCATATATCATTAAAACGAAAAAAGCTGTCATGGCTATTGGTGGATACAG 1850
BSNT_02177___ 1851 CGGTTCTGACCCGGCGATCACACTGACTCAATTCAAAAAACTTGTAAAAG 1900
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12880___yk 1851 CGGTTCTGACCCGGCAATCACACTGACTCAATTCAAAAAACTTGTAAAAG 1900
BSNT_02177___ 1901 AAGGAAAAGTGAAATACTTCTTGGCTTCTGGAATGGGAAGAGGCGGAAAC 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1901 AAGGAAAAGTGAAATACTTCTTGGCTTCTGGAATGGGAAGAGGCGGAAAC 1950
BSNT_02177___ 1951 AATGACATTGTTGAATGGGTTGAGAAAAATGGAAAAGAAGTAGCATCAGA 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 1951 AATGACATTGTTGAATGGGTTGAGAAAAATGGAAAAGAAGTAGCATCAGA 2000
BSNT_02177___ 2001 AAAATGGCAATCAAGTTCTGATCAAAAAACAGAAAATACTGATTCGGCTG 2050
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU12880___yk 2001 AAAATGGCAATCAAGTTCTGATCAAAAAACAGAAAATACTGATTCAGCTG 2050
BSNT_02177___ 2051 ATACATCAAGCAGCAAGGCTTCAGGTGAAAACGGCAAAATGGGCGGACCT 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 2051 ATACATCAAGCAGCAAGGCTTCAGGTGAAAACGGCAAAATGGGCGGACCT 2100
BSNT_02177___ 2101 GGCGGAATGAATCAGTCAGCAACATTATACGAACTACATGCTGATGAATA 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12880___yk 2101 GGCGGAATGAATCAGTCAGCAACATTATACGAACTACATGCTGATGAATA 2150
BSNT_02177___ 2151 G 2151
|
BSU12880___yk 2151 G 2151
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