Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02176 and BSU12870
See
Amino acid alignment /
Visit
BSNT_02176 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:41
# Commandline: needle
# -asequence dna-align/BSNT_02176___ykcA.1.22522.seq
# -bsequence dna-align/BSU12870___mhqA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02176___ykcA-BSU12870___mhqA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02176___ykcA-BSU12870___mhqA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02176___ykcA
# 2: BSU12870___mhqA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 951
# Identity: 935/951 (98.3%)
# Similarity: 935/951 (98.3%)
# Gaps: 0/951 ( 0.0%)
# Score: 4611.0
#
#
#=======================================
BSNT_02176___ 1 ATGAAAGTTAACGGCATTCACCACGTATCGGCATTAACGGCCGACGCACA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 1 ATGAAAGTTAACGGCATTCACCACGTATCGGCATTAACGGCCGACGCACA 50
BSNT_02176___ 51 AAAAAACTTGGATTTCTATAAGAAAGTATTAGGATTAAAGCTCGTCAAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 51 AAAAAACTTGGATTTCTATAAGAAAGTATTAGGATTAAAGCTCGTCAAAA 100
BSNT_02176___ 101 AATCCGTCAATCAGGATGAACCGACCATGTACCATCTGTTCTACGGAGAT 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU12870___mh 101 AATCCGTCAATCAGGATGAACCGACAATGTACCATCTGTTCTACGGAGAT 150
BSNT_02176___ 151 GAAGTGGCAAACCCGGGAACTGAGCTGACGTTTTTCGAGATTCCCCGCAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 151 GAAGTGGCAAACCCGGGAACTGAGCTGACGTTTTTCGAGATTCCCCGCAT 200
BSNT_02176___ 201 TGCACCGTTTCATGCAGGAACAAACAGTATTTCTTCTATTGGTTTGCGCG 250
|||||||||||||||.||||||||||||||||||||||||||.|||||||
BSU12870___mh 201 TGCACCGTTTCATGCGGGAACAAACAGTATTTCTTCTATTGGATTGCGCG 250
BSNT_02176___ 251 TCCCAAGCACAGAAGCCCTGCATTACTGGAAAGAACGTTTTGAAGAGCAG 300
|.|||.||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 251 TTCCAGGCACAGAAGCCCTGCATTACTGGAAAGAACGTTTTGAAGAGCAG 300
BSNT_02176___ 301 CAAGTAACGCACAGCGGCATCTCCAAAAGAGCCGGACGTGACATAATGGC 350
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU12870___mh 301 CAAGTAACGCACAGCGGCATCTCCAAAAGAGCCGGACGTGACATATTGGC 350
BSNT_02176___ 351 ATTTCAAGATCATGAAGGGCAGCGACTTGTGCTGACTGCTGATGAGGAAG 400
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU12870___mh 351 ATTTCAAGATCATGAGGGGCAGCGACTTGTGCTGACTGCTGATGAGGAAG 400
BSNT_02176___ 401 GAAAAGGATATGGCCTGCCTGTTAAACAGAGCGGCATTCCGGAAGAATTT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 401 GAAAAGGATATGGCCTGCCTGTTAAACAGAGCGGCATTCCGGAAGAATTT 450
BSNT_02176___ 451 TCGTTTCGCGGGTTAGGGCCGGTTGAACTGACTGTGCCATATGCTGAACC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 451 TCGTTTCGCGGGTTAGGGCCGGTTGAACTGACTGTGCCATATGCTGAACC 500
BSNT_02176___ 501 AACTTTACACGTATTGACGAATATTCTTGGATTTACAGAAATCAGCCGTG 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 501 AACTTTACACGTATTGACGAATATTCTTGGATTTACAGAAATCAGCCGTG 550
BSNT_02176___ 551 AACCAGTCGAAGGGCAAGGAACCGCCGTTATTCTGGAATCAGGAGAAGGC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 551 AACCAGTCGAAGGGCAAGGAACCGCCGTTATTCTGGAATCAGGAGAAGGC 600
BSNT_02176___ 601 GGTGCTGCAACGGAAATCCATTTAATAGAAAGAAACGATCTTCCGCGCGA 650
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU12870___mh 601 GGTGCTGCAACGGAAATCCATTTAATAGAAAGAAACGATCTTCCGCGAGA 650
BSNT_02176___ 651 GCGTCAAGGCAAAGGGAGTGTTCACCACGTCGCATTTCGGGTAAGAGATG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 651 GCGTCAAGGCAAAGGGAGTGTTCACCACGTCGCATTTCGGGTAAGAGATG 700
BSNT_02176___ 701 AAGAAGAACTTGCCGGGTGGCACCGGATCATCAGCCGCGAAGGCTTTAGC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12870___mh 701 AAGAAGAACTTGCCGGGTGGCACCGGATCATCAGCCGCGAAGGCTTTAGC 750
BSNT_02176___ 751 AATTCCGGCATTGTGGAGCGCTACTATTTCAAGGCGCTGTATTTCAGAGA 800
|||||.|||||.||.|||||||||||||||||||||||||||||||||||
BSU12870___mh 751 AATTCAGGCATAGTTGAGCGCTACTATTTCAAGGCGCTGTATTTCAGAGA 800
BSNT_02176___ 801 ACCGAACGGCATTTTGTTCGAGTTATCAACGGACGGACCGGGCTTTATGG 850
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU12870___mh 801 ACCGAACGGCATTTTGTTCGAGTTATCAACAGACGGACCGGGCTTTATGG 850
BSNT_02176___ 851 TAGATGAAAATCTTGATGAGCTTGGCCAAACGATCGCTCTTCCGCCGTAT 900
||||||||||||||||||||||||||||||||||.|||||||||||.|||
BSU12870___mh 851 TAGATGAAAATCTTGATGAGCTTGGCCAAACGATTGCTCTTCCGCCATAT 900
BSNT_02176___ 901 CTTGAGCATCGAAGAGCAGAAATTGAAGCGAAATTGAAACCGATCCAATA 950
||.||||||||||||||||||||||||||.||||||||||||||||||||
BSU12870___mh 901 CTAGAGCATCGAAGAGCAGAAATTGAAGCAAAATTGAAACCGATCCAATA 950
BSNT_02176___ 951 A 951
|
BSU12870___mh 951 A 951
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.