Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02174 and BSU12860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:19:41
# Commandline: needle
# -asequence dna-align/BSNT_02174___ykbA.1.22522.seq
# -bsequence dna-align/BSU12860___ykbA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02174___ykbA-BSU12860___ykbA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02174___ykbA-BSU12860___ykbA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02174___ykbA
# 2: BSU12860___ykbA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1317
# Identity: 1306/1317 (99.2%)
# Similarity: 1306/1317 (99.2%)
# Gaps: 0/1317 ( 0.0%)
# Score: 6486.0
#
#
#=======================================
BSNT_02174___ 1 ATGCATTCTGAAGACAACGGTTTGAAAAAAGAGATAGGCCTCTTGTTTGC 50
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 1 ATGCATACTGAAGACAACGGTTTGAAAAAAGAGATAGGCCTCTTGTTTGC 50
BSNT_02174___ 51 CCTTACTCTTGTCATCGGAACCATTATCGGTTCTGGTGTTTTTATGAAGC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 51 CCTTACTCTTGTCATCGGAACCATTATCGGTTCTGGTGTTTTTATGAAGC 100
BSNT_02174___ 101 CCGGCGCTGTGCTTGCTTATTCAGGCGATTCAAAAATGGCGCTTTTCGCC 150
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU12860___yk 101 CCGGCGCTGTGCTTGCTTATTCAGGTGATTCAAAAATGGCGCTTTTCGCC 150
BSNT_02174___ 151 TGGCTGTTAGGCGGTATTTTAACACTGGCGGGCGGTTTGACAATCGCGGA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 151 TGGCTGTTAGGCGGTATTTTAACACTGGCGGGCGGTTTGACAATCGCGGA 200
BSNT_02174___ 201 AATCGGAACGCAGATTCCAAAAACCGGCGGGCTTTATACGTACCTTGAAG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 201 AATCGGAACGCAGATTCCAAAAACCGGCGGGCTTTATACGTACCTTGAAG 250
BSNT_02174___ 251 AAGTGTACGGCGAGTTTTGGGGATTTTTGTGCGGCTGGGTGCAGATTATC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 251 AAGTGTACGGCGAGTTTTGGGGATTTTTGTGCGGCTGGGTGCAGATTATC 300
BSNT_02174___ 301 ATTTACGGCCCGGCGATTATTGGCGCGCTGGGTTTATATTTTGGATCTTT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 301 ATTTACGGCCCGGCGATTATTGGCGCGCTGGGTTTATATTTTGGATCTTT 350
BSNT_02174___ 351 AATGGCGAATCTTTTCGGCTGGGGATCTGGACTATCAAAAGTCATTGGAA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 351 AATGGCGAATCTTTTCGGCTGGGGATCTGGACTATCAAAAGTCATTGGAA 400
BSNT_02174___ 401 TTATAGCAGTTCTCTTTTTATGCGTCATTAATATTATCGGTACAAAATAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 401 TTATAGCAGTTCTCTTTTTATGCGTCATTAATATTATCGGTACAAAATAC 450
BSNT_02174___ 451 GGCGGTTTTGTCCAAACGCTGACAACGATCGGAAAACTGATTCCGATTGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 451 GGCGGTTTTGTCCAAACGCTGACAACGATCGGAAAACTGATTCCGATTGC 500
BSNT_02174___ 501 CTGCATCATCATCTTTGGCCTTTGGAAAGGCGATCAGCACATCTTCACAG 550
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU12860___yk 501 CTGCATCATCGTCTTTGGCCTTTGGAAAGGCGATCAGCACATCTTCACAG 550
BSNT_02174___ 551 CAGTAAACGAAAGCATTTCTGATATGAACTTCGGGGCGGCTATTTTAGCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 551 CAGTAAACGAAAGCATTTCTGATATGAACTTCGGGGCGGCTATTTTAGCT 600
BSNT_02174___ 601 ACGTTGTTTGCTTATGACGGATGGATTCTCCTTGCCGCTCTCGGCGGAGA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 601 ACGTTGTTTGCTTATGACGGATGGATTCTCCTTGCCGCTCTCGGCGGAGA 650
BSNT_02174___ 651 AATGAAAAATCCCGAAAAGCTGCTGCCACGCGCTATGACGGGCGGATTAT 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 651 AATGAAAAATCCCGAAAAGCTGCTGCCACGCGCTATGACGGGCGGATTAT 700
BSNT_02174___ 701 TAATTGTAACGGCGATCTATATTTTCATTAATTTTGCATTGCTTCACATC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 701 TAATTGTAACGGCGATCTATATTTTCATTAATTTTGCATTGCTTCACATC 750
BSNT_02174___ 751 CTGTCAGCGAACGAAATTGTCACGCTTGGTGAAAATGCGACAAGCACCGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 751 CTGTCAGCGAACGAAATTGTCACGCTTGGTGAAAATGCGACAAGCACCGC 800
BSNT_02174___ 801 GGCAACCATGCTGTTCGGGTCAATTGGCGGAAAGCTGATCAGTGTAGGGA 850
.|||||||||||||||||.|||||||||||||||||||||||||||||||
BSU12860___yk 801 TGCAACCATGCTGTTCGGTTCAATTGGCGGAAAGCTGATCAGTGTAGGGA 850
BSNT_02174___ 851 TTATCGTCAGCATCTTTGGGTGCTTAAATGGAAAGGTGCTTTCTTTCCCG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 851 TTATCGTCAGCATCTTTGGGTGCTTAAATGGAAAGGTGCTTTCTTTCCCG 900
BSNT_02174___ 901 CGTGTTTCATTTGCAATGGCGGAACGCAAACAGCTTCCATTTGCTGAAAA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 901 CGTGTTTCATTTGCAATGGCGGAACGCAAACAGCTTCCATTTGCTGAAAA 950
BSNT_02174___ 951 ACTGTCACATGTACACCCGTCGTTCCGCACACCATGGATTGCAATTTCTT 1000
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU12860___yk 951 ACTGTCACATGTACACCCGTCGTTCCGCACACCATGGATTGCGATTTCTT 1000
BSNT_02174___ 1001 TTCAAATTGCTTTAGCTTTGATTATGATGCTGATCAGCAACCCTGATAAG 1050
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU12860___yk 1001 TTCAAATTGCTTTGGCTTTGATTATGATGCTGATCAGCAACCCTGATAAG 1050
BSNT_02174___ 1051 CTCTCAGAAATCTCCATTTTCATGATCTACATCTTTTATGTGATGGCCTT 1100
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU12860___yk 1051 CTCTCAGAAATCTCCATTTTCATGATCTACATTTTTTATGTGATGGCCTT 1100
BSNT_02174___ 1101 TTTTGCAGTGTTTATTCTCCGCAAGCGAGCAAAGGGAAAAAAGCGCGCCT 1150
|||||||||||||||||||||||||||||||||||||.||||||||||||
BSU12860___yk 1101 TTTTGCAGTGTTTATTCTCCGCAAGCGAGCAAAGGGAGAAAAGCGCGCCT 1150
BSNT_02174___ 1151 ACAGTGTTCCGCTTTATCCATTTATGCCAATTCTGGCAATCGCGGGCTCC 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 1151 ACAGTGTTCCGCTTTATCCATTTATGCCAATTCTGGCAATCGCGGGCTCC 1200
BSNT_02174___ 1201 TTCTTTGTGCTAGGCAGCACACTCATTACAGATACAATGAGCTGCGGATT 1250
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU12860___yk 1201 TTCTTTGTGTTAGGCAGCACACTCATTACAGATACAATGAGCTGCGGATT 1250
BSNT_02174___ 1251 ATCCATCCTCATCGGCCTTGCCGGACTGCCTGTCTATTACGGGATGAAAA 1300
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU12860___yk 1251 ATCCATCCTCATCGGCCTTGCCGGACTGCCTGTTTATTACGGGATGAAAA 1300
BSNT_02174___ 1301 AACGAAAAGCAAGCTGA 1317
|||||||||||||||||
BSU12860___yk 1301 AACGAAAAGCAAGCTGA 1317
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