Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02172 and BSU12840

See Amino acid alignment / Visit BSNT_02172 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:19:40
# Commandline: needle
#    -asequence dna-align/BSNT_02172___pit.1.22522.seq
#    -bsequence dna-align/BSU12840___pit.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02172___pit-BSU12840___pit.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02172___pit-BSU12840___pit.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02172___pit
# 2: BSU12840___pit
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     995/1002 (99.3%)
# Similarity:   995/1002 (99.3%)
# Gaps:           0/1002 ( 0.0%)
# Score: 4947.0
# 
#
#=======================================

BSNT_02172___      1 ATGGATATTCTATTAATATTAACGATACTAATAGTCATTTGTGCTCTGGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi      1 ATGGATATTCTATTAATATTAACGATACTAATAGTCATTTGTGCTCTGGC     50

BSNT_02172___     51 GTTTGATTTCATCAACGGGTTTCATGATACGGCAAACGCAATTGCGACTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi     51 GTTTGATTTCATCAACGGGTTTCATGATACGGCAAACGCAATTGCGACTT    100

BSNT_02172___    101 CAGTATCAACAAAAGCGTTGAAACCGCGCCATGCCATTATATTGGCGGCT    150
                     |.|||||||||||||||||.||||||||||||||||||||||||||.|||
BSU12840___pi    101 CGGTATCAACAAAAGCGTTAAAACCGCGCCATGCCATTATATTGGCTGCT    150

BSNT_02172___    151 GTGATGAACTTTATCGGAGCAATGACGTTTACGGGTGTTGCCAAAACCAT    200
                     ||||||||||||.|||||||||||||||||||.|||||||||||||||||
BSU12840___pi    151 GTGATGAACTTTGTCGGAGCAATGACGTTTACAGGTGTTGCCAAAACCAT    200

BSNT_02172___    201 TACGAAAGACATCGTAGATCCTTATACGCTGGAAAATGGCTCTGTTGTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    201 TACGAAAGACATCGTAGATCCTTATACGCTGGAAAATGGCTCTGTTGTCA    250

BSNT_02172___    251 TTTTGGCTGCGCTACTCGCTGCAATTGCCTGGAACCTTATCACATGGTAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    251 TTTTGGCTGCGCTACTCGCTGCAATTGCCTGGAACCTTATCACATGGTAC    300

BSNT_02172___    301 TACGGTATCCCAAGCAGCTCATCCCATGCCATCATCGGCGCTATTGCCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    301 TACGGTATCCCAAGCAGCTCATCCCATGCCATCATCGGCGCTATTGCCGG    350

BSNT_02172___    351 TGCAGCCATTGCGGCAGCCGGATTTGCAGCGTTAAACTATAAGGGCTTCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    351 TGCAGCCATTGCGGCAGCCGGATTTGCAGCGTTAAACTATAAGGGCTTCA    400

BSNT_02172___    401 TTAAAATCATTGAAGCACTGATCCTATCACCAATTATTGCCTTTGTCCTT    450
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU12840___pi    401 TTAAAATCATTGAAGCACTGATTCTATCACCAATTATTGCCTTTGTCCTT    450

BSNT_02172___    451 GGTTTTATTCTTTATAGCATCGTTAAGCTGATTTTCAAAGACAGCAACTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    451 GGTTTTATTCTTTATAGCATCGTTAAGCTGATTTTCAAAGACAGCAACTT    500

BSNT_02172___    501 GGCGAAAACGAATAAGCAATTCCGCAGAGTGCAGATTGTAACAGCTGCCC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    501 GGCGAAAACGAATAAGCAATTCCGCAGAGTGCAGATTGTAACAGCTGCCC    550

BSNT_02172___    551 TGCAATCGTATACACACGGAACAAACGATGCGCAAAAAGCAATGGGAATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    551 TGCAATCGTATACACACGGAACAAACGATGCGCAAAAAGCAATGGGAATT    600

BSNT_02172___    601 ATCACAATGGCTCTCATCACAGCGAATTTACATACTTCTGCTAATGATAT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    601 ATCACAATGGCTCTCATCACAGCGAATTTACATACTTCTGCTAATGATAT    650

BSNT_02172___    651 TCCTACCTGGGTGCAATTCGCCTGCGCGACAGCCATGGGTCTCGGAACAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    651 TCCTACCTGGGTGCAATTCGCCTGCGCGACAGCCATGGGTCTCGGAACAT    700

BSNT_02172___    701 CAATCGGCGGCTGGAAAATCATCAAAACCGTTGGCGGAAAGATCATGAAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    701 CAATCGGCGGCTGGAAAATCATCAAAACCGTTGGCGGAAAGATCATGAAA    750

BSNT_02172___    751 ATCCGCCCGGTAAACGGTGTTTCCGCTGACTTAACCGGAGCAGCCATTAT    800
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    751 ATCCGTCCGGTAAACGGTGTTTCCGCTGACTTAACCGGAGCAGCCATTAT    800

BSNT_02172___    801 TTTCGGCGCCACGTTTATTCATTTGCCGGTCAGTACAACCCACGTCATTT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    801 TTTCGGCGCCACGTTTATTCATTTGCCGGTCAGTACAACCCACGTCATTT    850

BSNT_02172___    851 CTTCATCAATTCTTGGCGTCGGTGCGTCCCACCGCGTAAAAGGCGTAAAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    851 CTTCATCAATTCTTGGCGTCGGTGCGTCCCACCGCGTAAAAGGCGTAAAC    900

BSNT_02172___    901 TGGGGTACGGCCAAGCGAATGCTCATTACATGGGTCATCACGCTTCCGAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    901 TGGGGTACGGCCAAGCGAATGCTCATTACATGGGTCATCACGCTTCCGAT    950

BSNT_02172___    951 TTCAGCGACACTTGGTGCCATCGCCTACTTTATTTTAAATATGATATTTT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU12840___pi    951 TTCAGCGACACTTGGTGCCATCGCCTACTTTATTTTAAATATGATATTTT   1000

BSNT_02172___   1001 AA   1002
                     ||
BSU12840___pi   1001 AA   1002


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_02172 and BSU12840

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
